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camk1ga calcium/calmodulin-dependent protein kinase IGa [ Danio rerio (zebrafish) ]

Gene ID: 335654, updated on 27-Mar-2024

Summary

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Official Symbol
camk1gaprovided by ZNC
Official Full Name
calcium/calmodulin-dependent protein kinase IGaprovided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-7594
See related
Ensembl:ENSDARG00000044526 AllianceGenome:ZFIN:ZDB-GENE-030131-7594
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
camk1g; zgc:73127; wu:fk53c02
Summary
Predicted to enable calmodulin binding activity and calmodulin-dependent protein kinase activity. Predicted to be involved in peptidyl-serine phosphorylation. Predicted to act upstream of or within protein phosphorylation. Orthologous to human CAMK1G (calcium/calmodulin dependent protein kinase IG). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
all
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Genomic context

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Location:
chromosome: 22
Exon count:
13
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 22 NC_007133.7 (1045261..1069407)
105 previous assembly GRCz10 (GCF_000002035.5) 22 NC_007133.6 (1032469..1052509)

Chromosome 22 - NC_007133.7Genomic Context describing neighboring genes Neighboring gene peroxisome proliferator-activated receptor delta a Neighboring gene si:ch73-352p18.4 Neighboring gene laminin subunit beta 3 Neighboring gene guanylate cyclase activator 1Ab.1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. Corticotropin-releasing hormone family evolution: five ancestral genes remain in some lineages. Cardoso JC, et al. J Mol Endocrinol, 2016 Jul. PMID 27220618
  2. Lef1-dependent hypothalamic neurogenesis inhibits anxiety. Xie Y, et al. PLoS Biol, 2017 Aug. PMID 28837622, Free PMC Article
  3. Chronic reduction in cardiac output induces hypoxic signaling in larval zebrafish even at a time when convective oxygen transport is not required. Kopp R, et al. Physiol Genomics, 2010 Sep. PMID 20571107
  4. The vertebrate ancestral repertoire of visual opsins, transducin alpha subunits and oxytocin/vasopressin receptors was established by duplication of their shared genomic region in the two rounds of early vertebrate genome duplications. Lagman D, et al. BMC Evol Biol, 2013 Nov 2. PMID 24180662, Free PMC Article
  5. The zebrafish gene map defines ancestral vertebrate chromosomes. Woods IG, et al. Genome Res, 2005 Sep. PMID 16109975, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables calmodulin binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables calmodulin-dependent protein kinase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables calmodulin-dependent protein kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
  
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables transferase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in peptidyl-serine phosphorylation IBA
Inferred from Biological aspect of Ancestor
more info
  
acts_upstream_of_or_within phosphorylation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in intracellular anatomical structure IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
calcium/calmodulin-dependent protein kinase IGa
Names
calcium/calmodulin-dependent protein kinase IG
NP_956260.1
XP_021324979.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_199966.1 → NP_956260.1  calcium/calmodulin-dependent protein kinase IGa

    See identical proteins and their annotated locations for NP_956260.1

    Status: PROVISIONAL

    Source sequence(s)
    BC059490
    UniProtKB/TrEMBL
    A0A8M1PG68, Q6PC33
    Related
    ENSDARP00000065379.3, ENSDART00000065380.4
    Conserved Domains (1) summary
    cd14166
    Location:17 → 300
    STKc_CaMKI_gamma; Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type I gamma

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007133.7 Reference GRCz11 Primary Assembly

    Range
    1045261..1069407
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021469304.1 → XP_021324979.1  calcium/calmodulin-dependent protein kinase IGa isoform X1

    UniProtKB/TrEMBL
    A0A8M1PG68, Q6PC33
    Conserved Domains (1) summary
    cd14166
    Location:17 → 300
    STKc_CaMKI_gamma; Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type I gamma
Nucleotide Protein Strain
Heading Accession and Version

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