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gbp glycogen synthase kinase binding protein [ Danio rerio (zebrafish) ]

Gene ID: 30719, updated on 27-Mar-2024

Summary

Official Symbol
gbpprovided by ZNC
Official Full Name
glycogen synthase kinase binding proteinprovided by ZNC
Primary source
ZFIN:ZDB-GENE-990714-7
See related
Ensembl:ENSDARG00000040059 AllianceGenome:ZFIN:ZDB-GENE-990714-7
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary
Predicted to enable kinase activity. Predicted to act upstream of or within phosphorylation. Predicted to be active in cytoplasm. Is expressed in gill. Orthologous to several human genes including FRAT1 (FRAT regulator of WNT signaling pathway 1). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

Location:
chromosome: 16
Exon count:
1
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 16 NC_007127.7 (40954481..40955836)
105 previous assembly GRCz10 (GCF_000002035.5) 16 NC_007127.6 (41004449..41005804)

Chromosome 16 - NC_007127.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103908968 Neighboring gene uncharacterized LOC101885890 Neighboring gene potassium voltage-gated channel modifier subfamily V member 1 Neighboring gene DEK proto-oncogene Neighboring gene transfer RNA glutamic acid (anticodon CUC)

Genomic regions, transcripts, and products

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables kinase activity IEA
Inferred from Electronic Annotation
more info
 
enables transferase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within phosphorylation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
glycogen synthase kinase binding protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_131442.1NP_571517.1  glycogen synthase kinase binding protein

    See identical proteins and their annotated locations for NP_571517.1

    Status: PROVISIONAL

    Source sequence(s)
    AF060499
    UniProtKB/TrEMBL
    Q08C00, Q9YI01
    Related
    ENSDARP00000058586.3, ENSDART00000058587.5
    Conserved Domains (1) summary
    pfam05350
    Location:1134
    GSK-3_bind; Glycogen synthase kinase-3 binding

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007127.7 Reference GRCz11 Primary Assembly

    Range
    40954481..40955836
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)