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Or10j27 olfactory receptor family 10 subfamily J member 27 [ Rattus norvegicus (Norway rat) ]

Gene ID: 289239, updated on 11-Apr-2024

Summary

Official Symbol
Or10j27provided by RGD
Official Full Name
olfactory receptor family 10 subfamily J member 27provided by RGD
Primary source
RGD:1332648
See related
Ensembl:ENSRNOG00000064078 AllianceGenome:RGD:1332648
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Olr1579
Summary
Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
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Genomic context

See Or10j27 in Genome Data Viewer
Location:
13q24
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 13 NC_086031.1 (88122411..88123343, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 13 NC_051348.1 (85590082..85591014, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 13 NC_005112.4 (91637729..91638661, complement)

Chromosome 13 - NC_086031.1Genomic Context describing neighboring genes Neighboring gene olfactory receptor family 10 subfamily AT member 1, pseudogene 1 Neighboring gene olfactory receptor pseudogene 1578 Neighboring gene olfactory receptor family 10 subfamily J member 29, pseudogene 1 Neighboring gene olfactory receptor family 10 subfamily J member 7

Genomic regions, transcripts, and products

Pathways from PubChem

General gene information

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 
enables odorant binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables olfactory receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables olfactory receptor activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
olfactory receptor Olr1579
Names
olfactory receptor 1579
olfactory receptor gene Olr1579

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001000078.1NP_001000078.1  olfactory receptor Olr1579

    See identical proteins and their annotated locations for NP_001000078.1

    Status: REVIEWED

    Source sequence(s)
    JAXUCZ010000013
    UniProtKB/TrEMBL
    A0A8I6ANT0, A6JG75, D3ZNH5
    Related
    ENSRNOP00000080209.1, ENSRNOT00000096933.1
    Conserved Domains (2) summary
    pfam00001
    Location:41289
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:31307
    7tm_4; Olfactory receptor

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086031.1 Reference GRCr8

    Range
    88122411..88123343 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)