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Gnaz G protein subunit alpha z [ Rattus norvegicus (Norway rat) ]

Gene ID: 25740, updated on 5-Mar-2024

Summary

Official Symbol
Gnazprovided by RGD
Official Full Name
G protein subunit alpha zprovided by RGD
Primary source
RGD:2717
See related
Ensembl:ENSRNOG00000001313 AllianceGenome:RGD:2717
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
GXA; Hg1h
Summary
Enables G protein-coupled serotonin receptor binding activity. Involved in adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway. Located in cytosol and plasma membrane. Orthologous to human GNAZ (G protein subunit alpha z). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Brain (RPKM 67.9), Spleen (RPKM 11.8) and 5 other tissues See more
Orthologs
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Genomic context

Location:
20p12
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 20 NC_086038.1 (13642853..13693616, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 20 NC_051355.1 (13643473..13694240, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 20 NC_005119.4 (14593072..14644020, complement)

Chromosome 20 - NC_086038.1Genomic Context describing neighboring genes Neighboring gene BCR activator of RhoGEF and GTPase Neighboring gene RAB36, member RAS oncogene family Neighboring gene radial spoke head 14 homolog Neighboring gene ribosomal protein L9, pseudogene 20 Neighboring gene uncharacterized LOC120098888

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables G protein-coupled receptor binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables G protein-coupled serotonin receptor binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables G-protein beta/gamma-subunit complex binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 
enables GTPase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables GTPase activity TAS
Traceable Author Statement
more info
PubMed 
enables adenylate cyclase inhibitor activity ISO
Inferred from Sequence Orthology
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in cell body ISO
Inferred from Sequence Orthology
more info
 
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in dendrite ISO
Inferred from Sequence Orthology
more info
 
part_of heterotrimeric G-protein complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of heterotrimeric G-protein complex TAS
Traceable Author Statement
more info
PubMed 
is_active_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 
located_in plasma membrane TAS
Traceable Author Statement
more info
 

General protein information

Preferred Names
guanine nucleotide-binding protein G(z) subunit alpha
Names
Guanine nucleotide binding protein alpha
g(x) alpha chain
guanine nucleotide binding protein (G protein), alpha z polypeptide
guanine nucleotide binding protein, alpha z polypeptide
guanine nucleotide binding protein, alpha z subunit
gz-alpha
heterotrimeric guanine nucleotide-binding protein 1h

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_013189.2NP_037321.1  guanine nucleotide-binding protein G(z) subunit alpha

    See identical proteins and their annotated locations for NP_037321.1

    Status: PROVISIONAL

    Source sequence(s)
    J03773
    UniProtKB/Swiss-Prot
    P19627
    UniProtKB/TrEMBL
    A6JKM2
    Related
    ENSRNOP00000001779.2, ENSRNOT00000001779.5
    Conserved Domains (1) summary
    cd00066
    Location:34349
    G-alpha; Alpha subunit of G proteins (guanine nucleotide binding)

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086038.1 Reference GRCr8

    Range
    13642853..13693616 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008772867.3XP_008771089.1  guanine nucleotide-binding protein G(z) subunit alpha isoform X1

    See identical proteins and their annotated locations for XP_008771089.1

    UniProtKB/Swiss-Prot
    P19627
    UniProtKB/TrEMBL
    A6JKM2
    Conserved Domains (1) summary
    cd00066
    Location:34349
    G-alpha; Alpha subunit of G proteins (guanine nucleotide binding)