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Trhr thyrotropin releasing hormone receptor [ Rattus norvegicus (Norway rat) ]

Gene ID: 25570, updated on 11-Apr-2024

Summary

Official Symbol
Trhrprovided by RGD
Official Full Name
thyrotropin releasing hormone receptorprovided by RGD
Primary source
RGD:3904
See related
Ensembl:ENSRNOG00000005048 AllianceGenome:RGD:3904
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Enables identical protein binding activity and thyrotropin-releasing hormone receptor activity. Involved in positive regulation of cytosolic calcium ion concentration and positive regulation of protein-containing complex assembly. Located in cell surface. Used to study hypertension. Human ortholog(s) of this gene implicated in congenital nongoitrous hypothyroidism 7 and hypertension. Orthologous to human TRHR (thyrotropin releasing hormone receptor). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Brain (RPKM 16.6), Thymus (RPKM 13.9) and 1 other tissue See more
Orthologs
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Genomic context

See Trhr in Genome Data Viewer
Location:
7q31
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 7 NC_086025.1 (77233175..77277988)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 7 NC_051342.1 (75348672..75393310)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 7 NC_005106.4 (83113641..83153520)

Chromosome 7 - NC_086025.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134479720 Neighboring gene eukaryotic translation initiation factor 3 subunit E, pseudogene 1 Neighboring gene small nucleolar RNA SNORA17 Neighboring gene NudC domain containing 1 Neighboring gene ENY2, transcription and export complex 2 subunit

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
thyrotropin-releasing hormone receptor
Names
TRH-R
thyroliberin receptor

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_013047.3NP_037179.1  thyrotropin-releasing hormone receptor

    See identical proteins and their annotated locations for NP_037179.1

    Status: VALIDATED

    Source sequence(s)
    AW522207, M90308, X66726
    UniProtKB/Swiss-Prot
    Q01717, Q63948, Q63949
    UniProtKB/TrEMBL
    A6HRA7, G3V6M9
    Related
    ENSRNOP00000006783.4, ENSRNOT00000006783.6
    Conserved Domains (2) summary
    pfam00001
    Location:42320
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:38194
    7tm_4; Olfactory receptor

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086025.1 Reference GRCr8

    Range
    77233175..77277988
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063263031.1XP_063119101.1  thyrotropin-releasing hormone receptor isoform X1