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Crybb2 crystallin, beta B2 [ Rattus norvegicus (Norway rat) ]

Gene ID: 25422, updated on 30-Mar-2024

Summary

Official Symbol
Crybb2provided by RGD
Official Full Name
crystallin, beta B2provided by RGD
Primary source
RGD:2417
See related
Ensembl:ENSRNOG00000050023 AllianceGenome:RGD:2417
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Predicted to enable identical protein binding activity. Predicted to be a structural constituent of eye lens. Involved in camera-type eye development. Human ortholog(s) of this gene implicated in cataract and cataract 3 multiple types. Orthologous to human CRYBB2 (crystallin beta B2). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See Crybb2 in Genome Data Viewer
Location:
12q16
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 12 NC_086030.1 (49230192..49240116)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 12 NC_051347.1 (43569747..43579671)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 12 NC_005111.4 (49577580..49588555)

Chromosome 12 - NC_086030.1Genomic Context describing neighboring genes Neighboring gene KIAA1671 homolog Neighboring gene uncharacterized LOC102552141 Neighboring gene crystallin, beta B3 Neighboring gene uncharacterized LOC134481309 Neighboring gene G protein-coupled receptor kinase 3 Neighboring gene uncharacterized LOC134481310 Neighboring gene myosin XVIIIb

Genomic regions, transcripts, and products

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables identical protein binding ISO
Inferred from Sequence Orthology
more info
 
enables structural constituent of eye lens IBA
Inferred from Biological aspect of Ancestor
more info
 
enables structural constituent of eye lens ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
involved_in camera-type eye development IEP
Inferred from Expression Pattern
more info
PubMed 
acts_upstream_of_or_within camera-type eye development ISO
Inferred from Sequence Orthology
more info
 
involved_in lens development in camera-type eye IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in visual perception IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within visual perception ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
beta-crystallin B2
Names
R.norvegicus CRYBB2 gene (crystallin, beta B2)
beta-B2 crystallin
beta-crystallin Bp

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_012937.2NP_037069.1  beta-crystallin B2

    See identical proteins and their annotated locations for NP_037069.1

    Status: PROVISIONAL

    Source sequence(s)
    JAXUCZ010000012
    UniProtKB/Swiss-Prot
    P62697
    UniProtKB/TrEMBL
    A6J243
    Related
    ENSRNOP00000067708.1, ENSRNOT00000072683.2
    Conserved Domains (2) summary
    smart00247
    Location:18100
    XTALbg; Beta/gamma crystallins
    pfam00030
    Location:108190
    Crystall; Beta/Gamma crystallin

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086030.1 Reference GRCr8

    Range
    49230192..49240116
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)