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Avpr1a arginine vasopressin receptor 1A [ Rattus norvegicus (Norway rat) ]

Gene ID: 25107, updated on 11-Apr-2024

Summary

Official Symbol
Avpr1aprovided by RGD
Official Full Name
arginine vasopressin receptor 1Aprovided by RGD
Primary source
RGD:2185
See related
Ensembl:ENSRNOG00000004400 AllianceGenome:RGD:2185
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
V1a; AVPR; V1aR
Summary
This gene encodes a receptor for arginine vasopressin, a neurohypophyseal hormone involved in diuresis inhibition, smooth muscle contraction, liver glycogenolysis stimulation and regulation of adrenocorticotropic hormone release from the pituitary. This receptor represents one of three G protein-coupled arginine vasopressin receptors which functions through a phosphotidylinositol-calcium second messenger system in vascular and hepatic tissues. [provided by RefSeq, Jul 2008]
Expression
Biased expression in Liver (RPKM 395.2), Kidney (RPKM 31.7) and 2 other tissues See more
Orthologs
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Genomic context

See Avpr1a in Genome Data Viewer
Location:
7q22
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 7 NC_086025.1 (59999743..60003667)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 7 NC_051342.1 (58114306..58118230)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 7 NC_005106.4 (67341366..67345290, complement)

Chromosome 7 - NC_086025.1Genomic Context describing neighboring genes Neighboring gene transmembrane p24 trafficking protein 2, pseudogene 1 Neighboring gene ribitol xylosyltransferase 1 Neighboring gene vacuolar protein sorting 54 homolog (S. cerevisiae), pseudogene 1 Neighboring gene uncharacterized LOC134479598 Neighboring gene protein phosphatase, Mg2+/Mn2+ dependent, 1H Neighboring gene uncharacterized LOC134479882

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

General gene information

Markers

Clone Names

  • MGC108538

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables V1A vasopressin receptor binding IDA
Inferred from Direct Assay
more info
PubMed 
enables peptide binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables peptide hormone binding IMP
Inferred from Mutant Phenotype
more info
PubMed 
enables vasopressin receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables vasopressin receptor activity IDA
Inferred from Direct Assay
more info
PubMed 
enables vasopressin receptor activity IEA
Inferred from Electronic Annotation
more info
 
enables vasopressin receptor activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
enables vasopressin receptor activity ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in G protein-coupled receptor signaling pathway NAS
Non-traceable Author Statement
more info
PubMed 
involved_in calcium-mediated signaling IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in cellular response to hormone stimulus IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in cellular response to water deprivation IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in grooming behavior IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in maternal aggressive behavior IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in maternal behavior IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in myotube differentiation IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in negative regulation of female receptivity IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in negative regulation of transmission of nerve impulse IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of blood pressure IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of cell growth IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of cell population proliferation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of cell population proliferation ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of cellular pH reduction IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of cytosolic calcium ion concentration IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of glutamate secretion IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of glycogen catabolic process NAS
Non-traceable Author Statement
more info
PubMed 
involved_in positive regulation of heart rate IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of prostaglandin biosynthetic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of systemic arterial blood pressure IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of urine volume NAS
Non-traceable Author Statement
more info
PubMed 
involved_in positive regulation of vasoconstriction IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in positive regulation of vasoconstriction IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in regulation of blood pressure ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of corticotropin secretion NAS
Non-traceable Author Statement
more info
PubMed 
involved_in regulation of systemic arterial blood pressure by vasopressin IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within regulation of systemic arterial blood pressure by vasopressin ISO
Inferred from Sequence Orthology
more info
 
involved_in response to corticosterone IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in response to inorganic substance IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in response to organic substance IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in social behavior IDA
Inferred from Direct Assay
more info
PubMed 
involved_in social behavior IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in sperm ejaculation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in telencephalon development IEP
Inferred from Expression Pattern
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasmic vesicle membrane IEA
Inferred from Electronic Annotation
more info
 
located_in endocytic vesicle ISO
Inferred from Sequence Orthology
more info
 
located_in endosome ISO
Inferred from Sequence Orthology
more info
 
located_in membrane NAS
Non-traceable Author Statement
more info
PubMed 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
vasopressin V1a receptor
Names
antidiuretic hormone receptor 1a
arginine vasopressin receptor V1a
vascular/hepatic-type arginine vasopressin receptor

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_053019.2NP_444178.2  vasopressin V1a receptor

    See identical proteins and their annotated locations for NP_444178.2

    Status: REVIEWED

    Source sequence(s)
    U39450
    UniProtKB/Swiss-Prot
    P30560, Q5M8D1, Q62874, Q9QW18
    UniProtKB/TrEMBL
    A0A0G2JVF9, A6HQN0
    Related
    ENSRNOP00000005829.3, ENSRNOT00000005829.6
    Conserved Domains (3) summary
    pfam00001
    Location:68354
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    pfam08983
    Location:378424
    DUF1856; Domain of unknown function (DUF1856)
    cl21561
    Location:62189
    7tm_4; Olfactory receptor

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086025.1 Reference GRCr8

    Range
    59999743..60003667
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)