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Il9r interleukin 9 receptor [ Rattus norvegicus (Norway rat) ]

Gene ID: 24500, updated on 4-Jan-2025

Summary

Official Symbol
Il9rprovided by RGD
Official Full Name
interleukin 9 receptorprovided by RGD
Primary source
RGD:2907
See related
EnsemblRapid:ENSRNOG00000020630 AllianceGenome:RGD:2907
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Enables interleukin-9 binding activity and interleukin-9 receptor activity. Involved in positive regulation of cell growth. Predicted to be located in cell surface. Predicted to be active in external side of plasma membrane. Orthologous to human IL9R (interleukin 9 receptor). [provided by Alliance of Genome Resources, Jan 2025]
Expression
Biased expression in Thymus (RPKM 44.1), Spleen (RPKM 13.4) and 1 other tissue See more
Orthologs
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Genomic context

See Il9r in Genome Data Viewer
Location:
10q12
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (15936156..15947613)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (15431706..15444144)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (15697216..15708684)

Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene rhomboid 5 homolog 1 Neighboring gene small nuclear ribonucleoprotein U11/U12 subunit 25 Neighboring gene ribosomal protein S2, pseudogene 36 Neighboring gene uncharacterized LOC120095054

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Pathways from PubChem

General gene information

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables interleukin-9 binding  
enables interleukin-9 binding PubMed 
enables interleukin-9 receptor activity  
enables interleukin-9 receptor activity PubMed 
enables interleukin-9 receptor activity  
Component Evidence Code Pubs
located_in cell surface  
is_active_in external side of plasma membrane  
is_active_in plasma membrane  
located_in plasma membrane  

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_017021.2 → NP_058717.2  interleukin-9 receptor

    Status: PROVISIONAL

    Source sequence(s)
    JAXUCZ010000010
    UniProtKB/TrEMBL
    A6HDB7, G3V8S1, Q63216
    Related
    ENSRNOP00000028008.3, ENSRNOT00000028008.7

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086028.1 Reference GRCr8

    Range
    15936156..15947613
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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