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Erbb2 erb-b2 receptor tyrosine kinase 2 [ Rattus norvegicus (Norway rat) ]

Gene ID: 24337, updated on 11-Apr-2024

Summary

Symbol
Erbb2provided by RGD
Full Name
erb-b2 receptor tyrosine kinase 2provided by RGD
Primary source
RGD:2561
See related
Ensembl:ENSRNOG00000006450 AllianceGenome:RGD:2561
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
neu; HER2/neu
Summary
Enables Hsp90 protein binding activity; protein tyrosine kinase activity; and ubiquitin protein ligase binding activity. Involved in several processes, including animal organ development; nervous system development; and positive regulation of intracellular signal transduction. Located in several cellular components, including basolateral plasma membrane; lateral loop; and microvillus. Biomarker of congestive heart failure and median neuropathy. Human ortholog(s) of this gene implicated in carcinoma (multiple); dilated cardiomyopathy; high grade glioma; reproductive organ cancer (multiple); and urinary bladder cancer. Orthologous to human ERBB2 (erb-b2 receptor tyrosine kinase 2). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Kidney (RPKM 121.3), Lung (RPKM 59.5) and 8 other tissues See more
Orthologs
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Genomic context

Location:
10q31
Exon count:
28
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (83907491..83931365)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (83411197..83435078)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (86367596..86391728)

Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene phenylethanolamine-N-methyltransferase Neighboring gene post-GPI attachment to proteins phospholipase 3 Neighboring gene U6 spliceosomal RNA Neighboring gene migration and invasion enhancer 1 Neighboring gene growth factor receptor bound protein 7

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 
enables ErbB-3 class receptor binding IEA
Inferred from Electronic Annotation
more info
 
enables ErbB-3 class receptor binding ISO
Inferred from Sequence Orthology
more info
 
enables Hsp90 protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables RNA polymerase I core binding IEA
Inferred from Electronic Annotation
more info
 
enables RNA polymerase I core binding ISO
Inferred from Sequence Orthology
more info
 
enables RNA polymerase I core binding ISS
Inferred from Sequence or Structural Similarity
more info
 
enables coreceptor activity IEA
Inferred from Electronic Annotation
more info
 
enables coreceptor activity ISO
Inferred from Sequence Orthology
more info
 
enables growth factor binding IEA
Inferred from Electronic Annotation
more info
 
contributes_to growth factor binding ISO
Inferred from Sequence Orthology
more info
 
enables identical protein binding IEA
Inferred from Electronic Annotation
more info
 
enables identical protein binding ISO
Inferred from Sequence Orthology
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
 
enables protein heterodimerization activity ISO
Inferred from Sequence Orthology
more info
 
enables protein tyrosine kinase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables protein tyrosine kinase activity ISO
Inferred from Sequence Orthology
more info
 
enables protein-containing complex binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables receptor tyrosine kinase binding IEA
Inferred from Electronic Annotation
more info
 
enables receptor tyrosine kinase binding ISO
Inferred from Sequence Orthology
more info
 
enables signaling receptor binding ISO
Inferred from Sequence Orthology
more info
 
enables transmembrane receptor protein tyrosine kinase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables transmembrane receptor protein tyrosine kinase activity IEA
Inferred from Electronic Annotation
more info
 
enables transmembrane receptor protein tyrosine kinase activity ISO
Inferred from Sequence Orthology
more info
 
enables transmembrane signaling receptor activity ISO
Inferred from Sequence Orthology
more info
 
enables ubiquitin protein ligase binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in ERBB2-EGFR signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in ERBB2-EGFR signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in ERBB2-ERBB3 signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in ERBB2-ERBB3 signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in ERBB2-ERBB4 signaling pathway IDA
Inferred from Direct Assay
more info
PubMed 
involved_in ERBB2-ERBB4 signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in ERBB2-ERBB4 signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in Schwann cell development IEA
Inferred from Electronic Annotation
more info
 
involved_in Schwann cell development ISO
Inferred from Sequence Orthology
more info
 
involved_in cell surface receptor protein tyrosine kinase signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in cell surface receptor protein tyrosine kinase signaling pathway ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within cell surface receptor signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in cellular response to epidermal growth factor stimulus IEA
Inferred from Electronic Annotation
more info
 
involved_in cellular response to epidermal growth factor stimulus ISO
Inferred from Sequence Orthology
more info
 
involved_in cellular response to epidermal growth factor stimulus ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in cellular response to growth factor stimulus ISO
Inferred from Sequence Orthology
more info
 
involved_in cellular response to growth factor stimulus ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in estrous cycle IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in glial cell differentiation IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in heart development IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within heart development ISO
Inferred from Sequence Orthology
more info
 
involved_in immature T cell proliferation in thymus IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of immature T cell proliferation in thymus ISO
Inferred from Sequence Orthology
more info
 
involved_in intracellular signal transduction ISO
Inferred from Sequence Orthology
more info
 
involved_in intracellular signal transduction ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in liver development IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in mammary gland involution IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in motor neuron axon guidance IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within motor neuron axon guidance ISO
Inferred from Sequence Orthology
more info
 
involved_in multicellular organism development IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in myelination IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within myelination ISO
Inferred from Sequence Orthology
more info
 
involved_in myelination ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of apoptotic process IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in negative regulation of apoptotic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in negative regulation of immature T cell proliferation in thymus IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within negative regulation of immature T cell proliferation in thymus ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within nervous system development ISO
Inferred from Sequence Orthology
more info
 
involved_in neurogenesis IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in neuromuscular junction development IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within neuromuscular junction development ISO
Inferred from Sequence Orthology
more info
 
involved_in neuron differentiation IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in neurotransmitter receptor localization to postsynaptic specialization membrane IEA
Inferred from Electronic Annotation
more info
 
involved_in neurotransmitter receptor localization to postsynaptic specialization membrane ISO
Inferred from Sequence Orthology
more info
 
involved_in oligodendrocyte differentiation IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within oligodendrocyte differentiation ISO
Inferred from Sequence Orthology
more info
 
involved_in peripheral nervous system development IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within peripheral nervous system development ISO
Inferred from Sequence Orthology
more info
 
involved_in phosphatidylinositol 3-kinase/protein kinase B signal transduction IEA
Inferred from Electronic Annotation
more info
 
involved_in phosphatidylinositol 3-kinase/protein kinase B signal transduction ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of MAPK cascade IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in positive regulation of MAPK cascade IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of Ras protein signal transduction IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of Rho protein signal transduction IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of Rho protein signal transduction ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of cell adhesion IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of cell adhesion ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of cell growth IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of cell growth ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of cell growth ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in positive regulation of cell population proliferation IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in positive regulation of cell population proliferation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of epithelial cell proliferation IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of epithelial cell proliferation ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within positive regulation of gene expression ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of kinase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of protein phosphorylation ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of protein targeting to membrane IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of protein targeting to membrane ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of protein targeting to membrane ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in positive regulation of transcription by RNA polymerase I IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of transcription by RNA polymerase I ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of transcription by RNA polymerase I ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in positive regulation of translation IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of translation ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of translation ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in regulation of ERK1 and ERK2 cascade IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of ERK1 and ERK2 cascade ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of ERK1 and ERK2 cascade ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in regulation of cell differentiation TAS
Traceable Author Statement
more info
PubMed 
involved_in regulation of cell population proliferation TAS
Traceable Author Statement
more info
PubMed 
involved_in regulation of microtubule-based process IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of microtubule-based process ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of microtubule-based process ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in response to axon injury IDA
Inferred from Direct Assay
more info
PubMed 
involved_in response to progesterone IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in response to xenobiotic stimulus IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in semaphorin-plexin signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in semaphorin-plexin signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in signal transduction ISO
Inferred from Sequence Orthology
more info
 
involved_in skeletal muscle tissue development IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in sympathetic nervous system development IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in tongue development IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in wound healing IEA
Inferred from Electronic Annotation
more info
 
involved_in wound healing ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
part_of ERBB3:ERBB2 complex IEA
Inferred from Electronic Annotation
more info
 
part_of ERBB3:ERBB2 complex ISO
Inferred from Sequence Orthology
more info
 
located_in apical plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in apical plasma membrane IEA
Inferred from Electronic Annotation
more info
 
located_in apical plasma membrane ISO
Inferred from Sequence Orthology
more info
 
is_active_in basal plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in basal plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in basolateral plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in basolateral plasma membrane IEA
Inferred from Electronic Annotation
more info
 
located_in basolateral plasma membrane ISO
Inferred from Sequence Orthology
more info
 
located_in cell projection ISO
Inferred from Sequence Orthology
more info
 
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in cytoplasmic vesicle ISO
Inferred from Sequence Orthology
more info
 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 
located_in cytosol ISO
Inferred from Sequence Orthology
more info
 
located_in early endosome IEA
Inferred from Electronic Annotation
more info
 
located_in endosome membrane IEA
Inferred from Electronic Annotation
more info
 
located_in endosome membrane ISO
Inferred from Sequence Orthology
more info
 
located_in lateral loop IDA
Inferred from Direct Assay
more info
PubMed 
located_in microvillus IDA
Inferred from Direct Assay
more info
PubMed 
located_in myelin sheath IEA
Inferred from Electronic Annotation
more info
 
located_in myelin sheath ISO
Inferred from Sequence Orthology
more info
 
located_in neuromuscular junction IEA
Inferred from Electronic Annotation
more info
 
is_active_in neuromuscular junction ISO
Inferred from Sequence Orthology
more info
 
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in nucleus ISO
Inferred from Sequence Orthology
more info
 
located_in perinuclear region of cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 
located_in plasma membrane TAS
Traceable Author Statement
more info
 
located_in postsynaptic membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in presynaptic membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in presynaptic membrane ISO
Inferred from Sequence Orthology
more info
 
part_of receptor complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of receptor complex ISO
Inferred from Sequence Orthology
more info
 
located_in ruffle membrane IEA
Inferred from Electronic Annotation
more info
 
part_of semaphorin receptor complex IEA
Inferred from Electronic Annotation
more info
 
part_of semaphorin receptor complex ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
receptor tyrosine-protein kinase erbB-2
Names
Avian erythroblastosis viral (v-erb-B2) oncogene homologue 2 (neuro/glioblastoma derived oncogene homolog)
C-erbB-2
NEU proto-oncogene
epidermal growth factor receptor-related protein
p185erbB2
p185neu
proto-oncogene NEU
proto-oncogene c-ErbB-2
receptor tyrosine-protein kinase erbB-2-like
v-erb-b2 avian erythroblastic leukemia viral oncogene 2
v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog
NP_058699.2
XP_038941104.1
XP_038941105.1

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_017003.2NP_058699.2  receptor tyrosine-protein kinase erbB-2 precursor

    See identical proteins and their annotated locations for NP_058699.2

    Status: VALIDATED

    Source sequence(s)
    AY116182
    UniProtKB/TrEMBL
    F7F923, Q8K3F9
    Related
    ENSRNOP00000040591.3, ENSRNOT00000049070.4
    Conserved Domains (8) summary
    cd12094
    Location:645688
    TM_ErbB2; Transmembrane domain of ErbB2, a Protein Tyrosine Kinase
    smart00261
    Location:561607
    FU; Furin-like repeats
    cd00064
    Location:239284
    FU; Furin-like repeats. Cysteine rich region. Exact function of the domain is not known. Furin is a serine-kinase dependent proprotein processor. Other members of this family include endoproteases and cell surface receptors.
    cd05109
    Location:716994
    PTKc_HER2; Catalytic domain of the Protein Tyrosine Kinase, HER2
    pfam00757
    Location:193342
    Furin-like; Furin-like cysteine rich region
    pfam01030
    Location:55177
    Recep_L_domain; Receptor L domain
    pfam07714
    Location:724980
    Pkinase_Tyr; Protein tyrosine kinase
    pfam14843
    Location:514647
    GF_recep_IV; Growth factor receptor domain IV

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086028.1 Reference GRCr8

    Range
    83907491..83931365
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039085177.2XP_038941105.1  receptor tyrosine-protein kinase erbB-2 isoform X2

    UniProtKB/TrEMBL
    F7F923
    Conserved Domains (6) summary
    cd12094
    Location:534577
    TM_ErbB2; Transmembrane domain of ErbB2, a Protein Tyrosine Kinase
    PHA03247
    Location:9261108
    PHA03247; large tegument protein UL36; Provisional
    cd05109
    Location:605883
    PTKc_HER2; Catalytic domain of the Protein Tyrosine Kinase, HER2
    pfam00757
    Location:193342
    Furin-like; Furin-like cysteine rich region
    pfam01030
    Location:55177
    Recep_L_domain; Receptor L domain
    pfam14843
    Location:438536
    GF_recep_IV; Growth factor receptor domain IV
  2. XM_039085176.2XP_038941104.1  receptor tyrosine-protein kinase erbB-2 isoform X1

    UniProtKB/TrEMBL
    F7F923
    Conserved Domains (6) summary
    cd12094
    Location:612655
    TM_ErbB2; Transmembrane domain of ErbB2, a Protein Tyrosine Kinase
    PHA03247
    Location:10041186
    PHA03247; large tegument protein UL36; Provisional
    cd05109
    Location:683961
    PTKc_HER2; Catalytic domain of the Protein Tyrosine Kinase, HER2
    pfam00757
    Location:160309
    Furin-like; Furin-like cysteine rich region
    pfam01030
    Location:22144
    Recep_L_domain; Receptor L domain
    pfam14843
    Location:481614
    GF_recep_IV; Growth factor receptor domain IV