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Nqo1 NAD(P)H quinone dehydrogenase 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 24314, updated on 5-Mar-2024

Summary

Official Symbol
Nqo1provided by RGD
Official Full Name
NAD(P)H quinone dehydrogenase 1provided by RGD
Primary source
RGD:2503
See related
Ensembl:ENSRNOG00000012772 AllianceGenome:RGD:2503
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Dia4
Summary
Enables NAD(P)H dehydrogenase (quinone) activity and superoxide dismutase activity. Involved in several processes, including NADPH oxidation; regulation of apoptotic process; and response to ischemia. Located in cytosol; dendrite; and neuronal cell body. Used to study several diseases, including chronic kidney disease; colon cancer; hypertension; liver cirrhosis; and membranous glomerulonephritis. Biomarker of several diseases, including brain disease (multiple); chronic obstructive pulmonary disease; fatty liver disease (multiple); prostatitis; and ureteral obstruction. Human ortholog(s) of this gene implicated in several diseases, including asthma; hematologic cancer (multiple); lung disease (multiple); macular degeneration; and small cell carcinoma. Orthologous to human NQO1 (NAD(P)H quinone dehydrogenase 1). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Lung (RPKM 195.1), Liver (RPKM 132.4) and 9 other tissues See more
Orthologs
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Genomic context

Location:
19q12
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 19 NC_086037.1 (52205374..52220267, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 19 NC_051354.1 (35295633..35310528, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 19 NC_005118.4 (38422210..38437103)

Chromosome 19 - NC_086037.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein L10A, pseudogene 12 Neighboring gene nuclear factor of activated T-cells 5 Neighboring gene uncharacterized LOC134483351 Neighboring gene NIN1 (RPN12) binding protein 1 homolog Neighboring gene WW domain containing E3 ubiquitin protein ligase 2 Neighboring gene eukaryotic translation initiation factor 5B, pseudogene 1

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

General gene information

Markers

Clone Names

  • MGC93075

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables NAD(P)H dehydrogenase (quinone) activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables NAD(P)H dehydrogenase (quinone) activity IDA
Inferred from Direct Assay
more info
PubMed 
enables NAD(P)H dehydrogenase (quinone) activity ISO
Inferred from Sequence Orthology
more info
 
enables NADH dehydrogenase (quinone) activity IDA
Inferred from Direct Assay
more info
PubMed 
enables NADH dehydrogenase (quinone) activity ISO
Inferred from Sequence Orthology
more info
 
enables NADPH dehydrogenase (quinone) activity IEA
Inferred from Electronic Annotation
more info
 
enables identical protein binding ISO
Inferred from Sequence Orthology
more info
 
enables superoxide dismutase activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
Process Evidence Code Pubs
involved_in NADH oxidation IDA
Inferred from Direct Assay
more info
PubMed 
involved_in NADPH oxidation IDA
Inferred from Direct Assay
more info
PubMed 
involved_in cell redox homeostasis ISO
Inferred from Sequence Orthology
more info
 
involved_in cellular response to hydrogen peroxide IDA
Inferred from Direct Assay
more info
PubMed 
involved_in cellular response to metal ion IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in cellular response to oxidative stress ISO
Inferred from Sequence Orthology
more info
 
involved_in innate immune response ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of apoptotic process IDA
Inferred from Direct Assay
more info
PubMed 
involved_in negative regulation of protein catabolic process ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of protein catabolic process ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in positive regulation of neuron apoptotic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in protein catabolic process ISO
Inferred from Sequence Orthology
more info
 
involved_in protein polyubiquitination ISO
Inferred from Sequence Orthology
more info
 
involved_in removal of superoxide radicals ISO
Inferred from Sequence Orthology
more info
 
involved_in removal of superoxide radicals ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in response to L-glutamine IDA
Inferred from Direct Assay
more info
PubMed 
involved_in response to alkaloid IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in response to amine IDA
Inferred from Direct Assay
more info
PubMed 
involved_in response to carbohydrate IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in response to electrical stimulus IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in response to estradiol IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in response to ethanol IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in response to flavonoid IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in response to hormone IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in response to hydrogen sulfide IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in response to ischemia IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in response to lipopolysaccharide ISO
Inferred from Sequence Orthology
more info
 
involved_in response to nitrogen compound IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in response to nutrient IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in response to organic cyclic compound IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in response to organic substance IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in response to oxidative stress IEP
Inferred from Expression Pattern
more info
PubMed 
acts_upstream_of_or_within response to oxidative stress ISO
Inferred from Sequence Orthology
more info
 
involved_in response to oxidative stress ISO
Inferred from Sequence Orthology
more info
 
involved_in response to testosterone IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in response to tetrachloromethane IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in response to xenobiotic stimulus IDA
Inferred from Direct Assay
more info
PubMed 
involved_in response to xenobiotic stimulus IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in superoxide metabolic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in ubiquinone metabolic process ISO
Inferred from Sequence Orthology
more info
 
involved_in ubiquinone metabolic process ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in vitamin E metabolic process ISO
Inferred from Sequence Orthology
more info
 
involved_in vitamin E metabolic process ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in vitamin K metabolic process IDA
Inferred from Direct Assay
more info
PubMed 
involved_in vitamin K metabolic process ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm ISO
Inferred from Sequence Orthology
more info
 
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 
located_in cytosol ISO
Inferred from Sequence Orthology
more info
 
located_in dendrite IDA
Inferred from Direct Assay
more info
PubMed 
located_in neuronal cell body IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in nucleus ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
NAD(P)H dehydrogenase [quinone] 1
Names
DT-diaphorase
DTD
Diaphorase (NADH/NADPH)
NAD(P)H dehydrogenase, quinone 1
NAD(P)H:menadione oxidoreductase
NAD(P)H:quinone oxidoreductase 1
QR1
azoreductase
menadione reductase
phylloquinone reductase
quinone reductase 1
NP_058696.2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_017000.3NP_058696.2  NAD(P)H dehydrogenase [quinone] 1

    See identical proteins and their annotated locations for NP_058696.2

    Status: VALIDATED

    Source sequence(s)
    BC083542
    UniProtKB/Swiss-Prot
    P05982, Q63478
    UniProtKB/TrEMBL
    A0A8L2UJ69, A6IZ00
    Related
    ENSRNOP00000082814.1, ENSRNOT00000112166.1
    Conserved Domains (1) summary
    pfam02525
    Location:5212
    Flavodoxin_2; Flavodoxin-like fold

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086037.1 Reference GRCr8

    Range
    52205374..52220267 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)