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Ar androgen receptor [ Rattus norvegicus (Norway rat) ]

Gene ID: 24208, updated on 13-Apr-2024

Summary

Official Symbol
Arprovided by RGD
Official Full Name
androgen receptorprovided by RGD
Primary source
RGD:2147
See related
Ensembl:ENSRNOG00000005639 AllianceGenome:RGD:2147
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Tfm; Andr
Summary
Enables several functions, including androgen binding activity; androgen receptor binding activity; and nuclear receptor activity. Involved in several processes, including cellular response to hormone stimulus; mating; and regulation of transcription, DNA-templated. Located in several cellular components, including axon; dendrite; and nucleus. Used to study hypertension; osteoporosis; prostate adenocarcinoma; prostate cancer; and prostatic hypertrophy. Biomarker of acute kidney failure and androgen insensitivity syndrome. Human ortholog(s) of this gene implicated in several diseases, including attention deficit hyperactivity disorder; conduct disorder; disorder of sexual development (multiple); reproductive organ cancer (multiple); and spinal muscular atrophy (multiple). Orthologous to human AR (androgen receptor). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Adrenal (RPKM 352.8), Uterus (RPKM 74.9) and 7 other tissues See more
Orthologs
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Genomic context

Location:
Xq22
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) X NC_086039.1 (67135317..67304476)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) X NC_051356.1 (63104771..63273934)
106 previous assembly Rnor_6.0 (GCF_000001895.5) X NC_005120.4 (67656253..67828998)

Chromosome X - NC_086039.1Genomic Context describing neighboring genes Neighboring gene eukaryotic translation termination factor 1, pseudogene 1 Neighboring gene 3-hydroxyacyl-CoA dehydratase 3 like 1 Neighboring gene enolase 1, pseudogene 28 Neighboring gene dCMP deaminase, pseudogene 2

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables ATPase binding IEA
Inferred from Electronic Annotation
more info
 
enables ATPase binding ISO
Inferred from Sequence Orthology
more info
 
enables DNA binding TAS
Traceable Author Statement
more info
PubMed 
enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 
enables DNA-binding transcription activator activity, RNA polymerase II-specific ISO
Inferred from Sequence Orthology
more info
 
enables DNA-binding transcription factor activity ISO
Inferred from Sequence Orthology
more info
 
enables DNA-binding transcription factor activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables POU domain binding IEA
Inferred from Electronic Annotation
more info
 
enables POU domain binding ISO
Inferred from Sequence Orthology
more info
 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding ISO
Inferred from Sequence Orthology
more info
 
enables RNA polymerase II general transcription initiation factor binding IEA
Inferred from Electronic Annotation
more info
 
enables RNA polymerase II general transcription initiation factor binding ISO
Inferred from Sequence Orthology
more info
 
enables RNA polymerase II-specific DNA-binding transcription factor binding IEA
Inferred from Electronic Annotation
more info
 
enables RNA polymerase II-specific DNA-binding transcription factor binding ISO
Inferred from Sequence Orthology
more info
 
enables androgen binding IEA
Inferred from Electronic Annotation
more info
 
enables androgen binding IMP
Inferred from Mutant Phenotype
more info
PubMed 
enables androgen binding ISO
Inferred from Sequence Orthology
more info
 
enables androgen binding ISS
Inferred from Sequence or Structural Similarity
more info
 
enables beta-catenin binding IEA
Inferred from Electronic Annotation
more info
 
enables beta-catenin binding ISO
Inferred from Sequence Orthology
more info
 
enables beta-catenin binding ISS
Inferred from Sequence or Structural Similarity
more info
 
enables chromatin binding IDA
Inferred from Direct Assay
more info
PubMed 
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
 
enables chromatin binding ISO
Inferred from Sequence Orthology
more info
 
enables enzyme binding ISO
Inferred from Sequence Orthology
more info
 
enables estrogen response element binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables molecular adaptor activity ISO
Inferred from Sequence Orthology
more info
 
enables molecular condensate scaffold activity IEA
Inferred from Electronic Annotation
more info
 
enables molecular condensate scaffold activity ISO
Inferred from Sequence Orthology
more info
 
enables nuclear androgen receptor binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables nuclear receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables nuclear receptor activity IDA
Inferred from Direct Assay
more info
PubMed 
enables nuclear receptor activity IEA
Inferred from Electronic Annotation
more info
 
NOT enables nuclear receptor activity ISO
Inferred from Sequence Orthology
more info
 
enables nuclear receptor activity ISO
Inferred from Sequence Orthology
more info
 
enables nuclear receptor activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein domain specific binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables ribonucleotide binding IDA
Inferred from Direct Assay
more info
PubMed 
enables sequence-specific DNA binding IDA
Inferred from Direct Assay
more info
PubMed 
enables sequence-specific DNA binding ISO
Inferred from Sequence Orthology
more info
 
enables signaling receptor binding IEA
Inferred from Electronic Annotation
more info
 
enables signaling receptor binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables signaling receptor binding ISO
Inferred from Sequence Orthology
more info
 
enables steroid binding IEA
Inferred from Electronic Annotation
more info
 
enables transcription cis-regulatory region binding ISO
Inferred from Sequence Orthology
more info
 
enables transcription cis-regulatory region binding ISS
Inferred from Sequence or Structural Similarity
more info
 
enables transcription coactivator binding IEA
Inferred from Electronic Annotation
more info
 
enables transcription coactivator binding ISO
Inferred from Sequence Orthology
more info
 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in Leydig cell differentiation IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within Leydig cell differentiation ISO
Inferred from Sequence Orthology
more info
 
involved_in MAPK cascade IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of MAPK cascade ISO
Inferred from Sequence Orthology
more info
 
involved_in activation of prostate induction by androgen receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within activation of prostate induction by androgen receptor signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in androgen receptor signaling pathway IMP
Inferred from Mutant Phenotype
more info
PubMed 
NOT involved_in androgen receptor signaling pathway ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within androgen receptor signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in androgen receptor signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in animal organ formation IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within animal organ formation ISO
Inferred from Sequence Orthology
more info
 
involved_in cellular response to estrogen stimulus IEA
Inferred from Electronic Annotation
more info
 
involved_in cellular response to estrogen stimulus ISO
Inferred from Sequence Orthology
more info
 
involved_in cellular response to follicle-stimulating hormone stimulus IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in cellular response to steroid hormone stimulus IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in cellular response to steroid hormone stimulus ISO
Inferred from Sequence Orthology
more info
 
involved_in cellular response to testosterone stimulus IEA
Inferred from Electronic Annotation
more info
 
involved_in cellular response to testosterone stimulus ISO
Inferred from Sequence Orthology
more info
 
involved_in copulation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in epithelial cell differentiation involved in prostate gland development IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within epithelial cell differentiation involved in prostate gland development ISO
Inferred from Sequence Orthology
more info
 
involved_in epithelial cell morphogenesis IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within epithelial cell morphogenesis ISO
Inferred from Sequence Orthology
more info
 
involved_in epithelial cell proliferation IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of epithelial cell proliferation ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within fertilization ISO
Inferred from Sequence Orthology
more info
 
involved_in in utero embryonic development IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within in utero embryonic development ISO
Inferred from Sequence Orthology
more info
 
involved_in insulin-like growth factor receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of insulin-like growth factor receptor signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in intracellular estrogen receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of intracellular estrogen receptor signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in intracellular estrogen receptor signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in intracellular receptor signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in intracellular receptor signaling pathway ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in intracellular steroid hormone receptor signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in lateral sprouting involved in mammary gland duct morphogenesis IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within lateral sprouting involved in mammary gland duct morphogenesis ISO
Inferred from Sequence Orthology
more info
 
involved_in male courtship behavior IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in male genitalia morphogenesis IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within male genitalia morphogenesis ISO
Inferred from Sequence Orthology
more info
 
involved_in male gonad development IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within male gonad development ISO
Inferred from Sequence Orthology
more info
 
involved_in male sex differentiation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in male somatic sex determination IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within male somatic sex determination ISO
Inferred from Sequence Orthology
more info
 
involved_in mammary gland alveolus development IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within mammary gland alveolus development ISO
Inferred from Sequence Orthology
more info
 
involved_in morphogenesis of an epithelial fold IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within morphogenesis of an epithelial fold ISO
Inferred from Sequence Orthology
more info
 
involved_in multicellular organism growth IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within multicellular organism growth ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of DNA-templated transcription IDA
Inferred from Direct Assay
more info
PubMed 
involved_in negative regulation of cell population proliferation ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of epithelial cell proliferation IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within negative regulation of epithelial cell proliferation ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of extrinsic apoptotic signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in negative regulation of extrinsic apoptotic signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of extrinsic apoptotic signaling pathway ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in negative regulation of integrin biosynthetic process IEA
Inferred from Electronic Annotation
more info
 
involved_in negative regulation of integrin biosynthetic process ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of integrin biosynthetic process ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 
involved_in negative regulation of transcription by RNA polymerase II ISO
Inferred from Sequence Orthology
more info
 
involved_in non-membrane-bounded organelle assembly IEA
Inferred from Electronic Annotation
more info
 
involved_in non-membrane-bounded organelle assembly ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of DNA-templated transcription IDA
Inferred from Direct Assay
more info
PubMed 
involved_in positive regulation of DNA-templated transcription ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of MAPK cascade IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within positive regulation of MAPK cascade ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of cell differentiation IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of cell differentiation ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of cell population proliferation ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of cell population proliferation ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in positive regulation of epithelial cell proliferation involved in prostate gland development IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within positive regulation of epithelial cell proliferation involved in prostate gland development ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of gene expression ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of insulin-like growth factor receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within positive regulation of insulin-like growth factor receptor signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of integrin biosynthetic process IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of integrin biosynthetic process ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of intracellular estrogen receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within positive regulation of intracellular estrogen receptor signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of miRNA transcription IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of miRNA transcription ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of penile erection IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of phosphorylation IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of phosphorylation ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of phosphorylation ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in positive regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within positive regulation of transcription by RNA polymerase II ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of transcription by RNA polymerase II ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of transcription by RNA polymerase II ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in positive regulation of transcription by RNA polymerase III IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of transcription by RNA polymerase III ISO
Inferred from Sequence Orthology
more info
 
involved_in prostate gland epithelium morphogenesis IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within prostate gland epithelium morphogenesis ISO
Inferred from Sequence Orthology
more info
 
involved_in prostate gland growth IEA
Inferred from Electronic Annotation
more info
 
involved_in prostate gland growth IEP
Inferred from Expression Pattern
more info
PubMed 
acts_upstream_of_or_within prostate gland growth ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within regulation of DNA-templated transcription ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of developmental growth IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within regulation of developmental growth ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within regulation of gene expression ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within regulation of prostatic bud formation ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of protein localization to plasma membrane IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of protein localization to plasma membrane ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of protein localization to plasma membrane ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in regulation of systemic arterial blood pressure IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within regulation of systemic arterial blood pressure ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within regulation of transcription by RNA polymerase II ISO
Inferred from Sequence Orthology
more info
 
involved_in reproductive behavior IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of_or_within reproductive structure development ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within reproductive system development ISO
Inferred from Sequence Orthology
more info
 
involved_in response to estradiol IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in response to insulin IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in response to testosterone IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in seminiferous tubule development IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within seminiferous tubule development ISO
Inferred from Sequence Orthology
more info
 
involved_in single fertilization IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within single fertilization ISO
Inferred from Sequence Orthology
more info
 
involved_in skeletal muscle hypertrophy IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in spermatogenesis IEA
Inferred from Electronic Annotation
more info
 
involved_in spermatogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within spermatogenesis ISO
Inferred from Sequence Orthology
more info
 
involved_in tertiary branching involved in mammary gland duct morphogenesis IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within tertiary branching involved in mammary gland duct morphogenesis ISO
Inferred from Sequence Orthology
more info
 
involved_in transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of transcription by RNA polymerase II ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in axon IDA
Inferred from Direct Assay
more info
PubMed 
part_of chromatin IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of chromatin IEA
Inferred from Electronic Annotation
more info
 
part_of chromatin ISO
Inferred from Sequence Orthology
more info
 
part_of chromatin ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in cytoplasm ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 
located_in cytosol ISO
Inferred from Sequence Orthology
more info
 
located_in dendrite IDA
Inferred from Direct Assay
more info
PubMed 
located_in nuclear speck IEA
Inferred from Electronic Annotation
more info
 
located_in nuclear speck ISO
Inferred from Sequence Orthology
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in nucleus ISO
Inferred from Sequence Orthology
more info
 
located_in nucleus ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 
part_of protein-containing complex ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
androgen receptor
Names
androgen receptor (Testicular feminization), same as Tfm
dihydrotestosterone receptor
nuclear receptor subfamily 3 group C member 4

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_012502.2NP_036634.2  androgen receptor

    Status: PROVISIONAL

    Source sequence(s)
    JAXUCZ010000021
    UniProtKB/Swiss-Prot
    P15207, Q63049
    UniProtKB/TrEMBL
    A0A0G2JSI8, A6IQ56
    Related
    ENSRNOP00000009129.5, ENSRNOT00000009129.8
    Conserved Domains (3) summary
    cd07073
    Location:655900
    NR_LBD_AR; Ligand binding domain of the nuclear receptor androgen receptor, ligand activated transcription regulator
    cd07173
    Location:537618
    NR_DBD_AR; DNA-binding domain of androgen receptor (AR) is composed of two C4-type zinc fingers
    pfam02166
    Location:6443
    Androgen_recep; Androgen receptor

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086039.1 Reference GRCr8

    Range
    67135317..67304476
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)