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Adra2c adrenoceptor alpha 2C [ Rattus norvegicus (Norway rat) ]

Gene ID: 24175, updated on 11-Apr-2024

Summary

Official Symbol
Adra2cprovided by RGD
Official Full Name
adrenoceptor alpha 2Cprovided by RGD
Primary source
RGD:2058
See related
Ensembl:ENSRNOG00000009299 AllianceGenome:RGD:2058
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Predicted to enable several functions, including alpha-2A adrenergic receptor binding activity; alpha2-adrenergic receptor activity; and protein dimerization activity. Involved in several processes, including negative regulation of uterine smooth muscle contraction; positive regulation of vasoconstriction; and regulation of sensory perception of pain. Located in axon terminus and neuronal cell body. Is active in glutamatergic synapse. Is integral component of postsynaptic density membrane. Human ortholog(s) of this gene implicated in congestive heart failure. Orthologous to human ADRA2C (adrenoceptor alpha 2C). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

Location:
14q21
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 14 NC_086032.1 (79695514..79697476, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 14 NC_051349.1 (75470884..75472846, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 14 NC_005113.4 (80730307..80732010, complement)

Chromosome 14 - NC_086032.1Genomic Context describing neighboring genes Neighboring gene H6 family homeobox 1 Neighboring gene uncharacterized LOC134481908 Neighboring gene ubiquitin-conjugating enzyme E2 variant 1-like Neighboring gene LDL receptor related protein associated protein 1

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables G protein-coupled receptor activity ISO
Inferred from Sequence Orthology
more info
 
enables alpha-2A adrenergic receptor binding ISO
Inferred from Sequence Orthology
more info
 
enables alpha2-adrenergic receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables alpha2-adrenergic receptor activity ISO
Inferred from Sequence Orthology
more info
 
enables epinephrine binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables epinephrine binding ISO
Inferred from Sequence Orthology
more info
 
enables protein heterodimerization activity ISO
Inferred from Sequence Orthology
more info
 
enables protein homodimerization activity ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in axon IDA
Inferred from Direct Assay
more info
PubMed 
located_in axon terminus IDA
Inferred from Direct Assay
more info
PubMed 
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
 
is_active_in glutamatergic synapse EXP
Inferred from Experiment
more info
PubMed 
is_active_in glutamatergic synapse IDA
Inferred from Direct Assay
more info
PubMed 
located_in neuronal cell body IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 
is_active_in postsynaptic density membrane EXP
Inferred from Experiment
more info
PubMed 
is_active_in postsynaptic density membrane IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in postsynaptic membrane IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
alpha-2C adrenergic receptor
Names
Adrenergic alpha2C- receptor class I
Adrenergic, alpha2C-, receptor class I
adrenergic receptor, alpha 2c
adrenergic, alpha-2C-, receptor
alpha-2 adrenergic receptor subtype C4
alpha-2C adrenoceptor
alpha-2C adrenoreceptor
alpha-2CAR

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_138506.2NP_612515.2  alpha-2C adrenergic receptor

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000014
    UniProtKB/Swiss-Prot
    P22086
    UniProtKB/TrEMBL
    A6IK05
    Related
    ENSRNOP00000012322.1, ENSRNOT00000012322.4
    Conserved Domains (1) summary
    cd15323
    Location:60444
    7tmA_alpha2C_AR; alpha-2 adrenergic receptors subtype C, member of the class A family of seven-transmembrane G protein-coupled receptors

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086032.1 Reference GRCr8

    Range
    79695514..79697476 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)