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Ets2 E26 avian leukemia oncogene 2, 3' domain [ Mus musculus (house mouse) ]

Gene ID: 23872, updated on 21-Apr-2024

Summary

Official Symbol
Ets2provided by MGI
Official Full Name
E26 avian leukemia oncogene 2, 3' domainprovided by MGI
Primary source
MGI:MGI:95456
See related
Ensembl:ENSMUSG00000022895 AllianceGenome:MGI:95456
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Ets-2
Summary
Enables RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Acts upstream of or within ectodermal cell fate commitment; mesoderm development; and primitive streak formation. Predicted to be located in cytosol; nucleoplasm; and plasma membrane. Predicted to be active in nucleus. Is expressed in several structures, including alimentary system; embryo mesenchyme; genitourinary system; sensory organ; and skeleton. Orthologous to human ETS2 (ETS proto-oncogene 2, transcription factor). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in thymus adult (RPKM 84.5), lung adult (RPKM 48.0) and 27 other tissues See more
Orthologs
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Genomic context

Location:
16 C4; 16 56.64 cM
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (95503274..95522093)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (95702407..95721049)

Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 31901 Neighboring gene predicted gene, 31989 Neighboring gene STARR-positive B cell enhancer mm9_chr16:95950428-95950729 Neighboring gene CapStarr-seq enhancer MGSCv37_chr16:95971936-95972137 Neighboring gene STARR-seq mESC enhancer starr_41603 Neighboring gene STARR-seq mESC enhancer starr_41604 Neighboring gene predicted gene 6599 Neighboring gene STARR-seq mESC enhancer starr_41606 Neighboring gene predicted gene, 32130 Neighboring gene predicted gene, 41509

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Component Evidence Code Pubs
located_in cytosol ISO
Inferred from Sequence Orthology
more info
 
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_011809.3NP_035939.3  protein C-ets-2

    See identical proteins and their annotated locations for NP_035939.3

    Status: VALIDATED

    Source sequence(s)
    AK038348, BE134375, BY140250
    Consensus CDS
    CCDS37412.1
    UniProtKB/Swiss-Prot
    P15037
    UniProtKB/TrEMBL
    Q3UAL8, Q3UMD7, Q3UP99, Q99K36
    Related
    ENSMUSP00000023612.9, ENSMUST00000023612.17
    Conserved Domains (2) summary
    cd08543
    Location:85173
    SAM_PNT-ETS-2; Sterile alpha motif (SAM)/Pointed domain of ETS-2
    smart00413
    Location:361445
    ETS; erythroblast transformation specific domain

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000082.7 Reference GRCm39 C57BL/6J

    Range
    95503274..95522093
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)