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Rnu2-10 U2 small nuclear RNA 10 [ Mus musculus (house mouse) ]

Gene ID: 19848, updated on 8-Feb-2024

Summary

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Official Symbol
Rnu2-10provided by MGI
Official Full Name
U2 small nuclear RNA 10provided by MGI
Primary source
MGI:MGI:97976
See related
Ensembl:ENSMUSG00000118837 AllianceGenome:MGI:97976
Gene type
snRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Rnu2; nmf291
Summary
Is expressed in early conceptus. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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See Rnu2-10 in Genome Data Viewer
Location:
11 D; 11 65.48 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (101549064..101549250)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (101658238..101658424)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_30777 Neighboring gene predicted gene, 24950 Neighboring gene STARR-positive B cell enhancer ABC_E3024 Neighboring gene predicted gene, 23971 Neighboring gene STARR-positive B cell enhancer ABC_E9038 Neighboring gene ADP-ribosylation factor-like 4D Neighboring gene STARR-seq mESC enhancer starr_30778 Neighboring gene predicted gene, 39391

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Mutation of a U2 snRNA gene causes global disruption of alternative splicing and neurodegeneration. Jia Y, et al. Cell, 2012 Jan 20. PMID 22265417, Free PMC Article
  2. Sequence of a mouse U2 snRNA gene expressed in transfected mouse cells. Moshier JA, et al. Nucleic Acids Res, 1988 Jul 25. PMID 3405775, Free PMC Article
  3. Structure and in vitro transcription of a mouse B1 cluster containing a unique B1 dimer. Moshier JA, et al. Gene, 1987. PMID 3692173
  4. Genes and pseudogenes for mouse U1 and U2 small nuclear RNAs. Nojima H, et al. J Biol Chem, 1983 Jul 10. PMID 6190807
  5. Targeted disruption of the murine large nuclear KIAA1440/Ints1 protein causes growth arrest in early blastocyst stage embryos and eventual apoptotic cell death. Hata T, et al. Biochim Biophys Acta, 2007 Jul. PMID 17544522

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_004414.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    X07913
    Related
    ENSMUST00000240231.1

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    101549064..101549250
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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