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fshr follicle stimulating hormone receptor [ Danio rerio (zebrafish) ]

Gene ID: 195820, updated on 27-Mar-2024

Summary

Official Symbol
fshrprovided by ZNC
Official Full Name
follicle stimulating hormone receptorprovided by ZNC
Primary source
ZFIN:ZDB-GENE-020423-5
See related
Ensembl:ENSDARG00000071494 AllianceGenome:ZFIN:ZDB-GENE-020423-5
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
GTHR-I; zfGTHR-I
Summary
Enables follicle-stimulating hormone receptor activity. Acts upstream of or within male gonad development; ovarian follicle development; and spermatogenesis. Predicted to be located in basolateral plasma membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Is expressed in Leydig cell; female organism; gonad; and kidney. Human ortholog(s) of this gene implicated in 46 XX gonadal dysgenesis; ovarian dysgenesis 1; and ovarian hyperstimulation syndrome. Orthologous to human FSHR (follicle stimulating hormone receptor). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

Location:
chromosome: 12
Exon count:
10
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 12 NC_007123.7 (24738966..24770184)
105 previous assembly GRCz10 (GCF_000002035.5) 12 NC_007123.6 (24617747..24648965)

Chromosome 12 - NC_007123.7Genomic Context describing neighboring genes Neighboring gene ankyrin repeat and SOCS box containing 3 Neighboring gene neurexin 1a Neighboring gene uncharacterized LOC110440142 Neighboring gene forkhead box N2b

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

General gene information

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables G protein-coupled peptide receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 
enables follicle-stimulating hormone receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables follicle-stimulating hormone receptor activity IDA
Inferred from Direct Assay
more info
PubMed 
enables protein-hormone receptor activity IEA
Inferred from Electronic Annotation
more info
 
enables thyroid-stimulating hormone receptor activity IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in basolateral plasma membrane IEA
Inferred from Electronic Annotation
more info
 
located_in lateral plasma membrane IEA
Inferred from Electronic Annotation
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
follicle-stimulating hormone receptor
Names
gonadotropic hormone I

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001001812.1NP_001001812.1  follicle-stimulating hormone receptor precursor

    See identical proteins and their annotated locations for NP_001001812.1

    Status: PROVISIONAL

    Source sequence(s)
    AY424301
    UniProtKB/TrEMBL
    Q6TCF9
    Related
    ENSDARP00000096529.4, ENSDART00000105751.5
    Conserved Domains (3) summary
    sd00033
    Location:79103
    LRR_RI; leucine-rich repeat [structural motif]
    pfam00001
    Location:360607
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    pfam13306
    Location:93224
    LRR_5; Leucine rich repeats (6 copies)

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007123.7 Reference GRCz11 Primary Assembly

    Range
    24738966..24770184
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394844.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    77132..112371
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)