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Prl prolactin [ Mus musculus (house mouse) ]

Gene ID: 19109, updated on 21-Apr-2024

Summary

Official Symbol
Prlprovided by MGI
Official Full Name
prolactinprovided by MGI
Primary source
MGI:MGI:97762
See related
Ensembl:ENSMUSG00000021342 AllianceGenome:MGI:97762
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gha1; Prl1a1
Summary
Predicted to enable hormone activity and prolactin receptor binding activity. Acts upstream of or within several processes, including mammary gland development; maternal behavior; and positive regulation of receptor signaling pathway via JAK-STAT. Located in secretory granule. Is expressed in hippocampus; pituitary gland; placenta; and trophoblast giant cell. Human ortholog(s) of this gene implicated in carotid artery disease. Orthologous to human PRL (prolactin). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Low expression observed in reference dataset See more
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Genomic context

Location:
13 A3.1; 13 12.25 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (27241553..27249187)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (27057570..27065204)

Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L27a-like Neighboring gene HDGF like 1 Neighboring gene STARR-seq mESC enhancer starr_34013 Neighboring gene STARR-seq mESC enhancer starr_34014 Neighboring gene prolactin family 3, subfamily d, member 1 Neighboring gene prolactin family 3, subfamily d, member 1

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2)  1 citation
  • Endonuclease-mediated (2) 

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables hormone activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables hormone activity TAS
Traceable Author Statement
more info
PubMed 
enables prolactin receptor binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables prolactin receptor binding ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
acts_upstream_of cell population proliferation IGI
Inferred from Genetic Interaction
more info
PubMed 
acts_upstream_of epithelial cell proliferation IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in female pregnancy IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within lactation IEA
Inferred from Electronic Annotation
more info
 
involved_in mammary gland development IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within mammary gland development IGI
Inferred from Genetic Interaction
more info
PubMed 
acts_upstream_of_or_within maternal behavior IGI
Inferred from Genetic Interaction
more info
PubMed 
acts_upstream_of negative regulation of endothelial cell proliferation ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of canonical NF-kappaB signal transduction ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of cell population proliferation IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within positive regulation of cell population proliferation IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in positive regulation of cell population proliferation ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within positive regulation of epithelial cell proliferation IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in positive regulation of epithelial cell proliferation ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of lactation IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in positive regulation of miRNA transcription ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of receptor signaling pathway via JAK-STAT IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within positive regulation of receptor signaling pathway via JAK-STAT IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in positive regulation of receptor signaling pathway via JAK-STAT ISO
Inferred from Sequence Orthology
more info
 
involved_in prolactin signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of ossification ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within regulation of receptor signaling pathway via JAK-STAT IDA
Inferred from Direct Assay
more info
PubMed 
involved_in response to nutrient levels IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
located_in extracellular region ISO
Inferred from Sequence Orthology
more info
 
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in extracellular space ISO
Inferred from Sequence Orthology
more info
 
located_in secretory granule IDA
Inferred from Direct Assay
more info
PubMed 
located_in secretory granule ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
prolactin
Names
growth hormone a1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001163530.1NP_001157002.1  prolactin isoform 2 precursor

    See identical proteins and their annotated locations for NP_001157002.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) uses an alternate in-frame splice site in the coding region, compared to variant 1. This results in a shorter protein (isoform 2), compared to isoform 1.
    Source sequence(s)
    AK133645, AL591843
    UniProtKB/TrEMBL
    Q3TT66, Q9CPQ0
    Related
    ENSMUSP00000018061.6, ENSMUST00000018061.7
    Conserved Domains (1) summary
    cd10288
    Location:31227
    prolactin_like; Prolactin (PRL or PRL1), chorionic somatomammotropin, and related pituitary gland hormones
  2. NM_011164.2NP_035294.2  prolactin isoform 1 precursor

    See identical proteins and their annotated locations for NP_035294.2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
    Source sequence(s)
    AK161619, AL591843
    Consensus CDS
    CCDS26389.1
    UniProtKB/Swiss-Prot
    P06879, Q544X8
    UniProtKB/TrEMBL
    Q9CPQ2
    Related
    ENSMUSP00000105998.4, ENSMUST00000110369.10
    Conserved Domains (1) summary
    cd10288
    Location:32228
    prolactin_like; Prolactin (PRL or PRL1), chorionic somatomammotropin, and related pituitary gland hormones

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000079.7 Reference GRCm39 C57BL/6J

    Range
    27241553..27249187
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)