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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001163540.1 → NP_001157012.1 plectin isoform 12alpha
See identical proteins and their annotated locations for NP_001157012.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (13), also known as 12alpha, differs in the 5' UTR and the 5' coding region, and contains an additional in-frame coding exon compared to variant 1. The resulting protein (isoform 12alpha) contains a distinct N-terminus and contains a 5 aa internal protein segment compared to isoform 1c. This variant (13) contains the same 5' coding exon as variant 6 but also contains an alternate in-frame exon so the resulting protein contains a 5aa internal segment compared to isoform 1.
- Source sequence(s)
-
AF188008, AI464512, AY480033, CN669707
- Consensus CDS
-
CCDS49647.1
- UniProtKB/Swiss-Prot
- E9QN87, Q6S384, Q6S389, Q6S394, Q9CS65, Q9QUT2, Q9QXQ8, Q9QXQ9, Q9QXR0, Q9QXR1, Q9QXR2, Q9QXR3, Q9QXR4, Q9QXR5, Q9QXR6, Q9QXR7, Q9QXR8, Q9QXR9, Q9QXS0, Q9QXS1, Q9QXS2, Q9QXS3
- UniProtKB/TrEMBL
-
Q6S388
- Related
- ENSMUSP00000073124.7, ENSMUST00000073418.13
- Conserved Domains (12) summary
-
- smart00150
Location:667 → 761
- SPEC; Spectrin repeats
- smart00250
Location:3238 → 3274
- PLEC; Plectin repeat
- cd00014
Location:186 → 293
- CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
- cd00176
Location:763 → 941
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- pfam00307
Location:308 → 406
- CH; Calponin homology (CH) domain
- pfam00681
Location:2948 → 2989
- Plectin; Plectin repeat
- pfam01576
Location:1526 → 2713
- Myosin_tail_1; Myosin tail
- pfam03501
Location:7 → 101
- S10_plectin; Plectin/S10 domain
- cd16269
Location:2477 → 2490
- GBP_C; coiled coil [structural motif]
- cl02488
Location:1871 → 2046
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- cl20817
Location:2326 → 2510
- GBP_C; Guanylate-binding protein, C-terminal domain
- cl21478
Location:1620 → 1743
- ATP-synt_B; ATP synthase B/B' CF(0)
-
NM_001163542.1 → NP_001157014.1 plectin isoform 1c2alpha3alpha
Status: REVIEWED
- Description
- Transcript Variant: This variant (15), also known as 1c2alpha3alpha, contains two alternate in-frame exons compared to variant 1. This results in a protein (isoform 1c2alpha3alpha) with two internal protein segments (5 and 12 aa, respectively) compared to isoform 1c.
- Source sequence(s)
-
AF188013, AI464512, AY480033, CN669707
- Consensus CDS
-
CCDS49649.1
- UniProtKB/TrEMBL
-
Q6S392
- Related
- ENSMUSP00000087037.4, ENSMUST00000089610.10
- Conserved Domains (10) summary
-
- smart00150
Location:565 → 659
- SPEC; Spectrin repeats
- smart00250
Location:3136 → 3172
- PLEC; Plectin repeat
- cd00014
Location:72 → 191
- CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
- cd00176
Location:661 → 839
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- pfam00307
Location:206 → 304
- CH; Calponin homology (CH) domain
- pfam00681
Location:2846 → 2887
- Plectin; Plectin repeat
- pfam01576
Location:1424 → 2611
- Myosin_tail_1; Myosin tail
- cd16269
Location:2375 → 2388
- GBP_C; coiled coil [structural motif]
- cl20817
Location:2224 → 2408
- GBP_C; Guanylate-binding protein, C-terminal domain
- cl21478
Location:1518 → 1641
- ATP-synt_B; ATP synthase B/B' CF(0)
-
NM_001163549.1 → NP_001157021.1 plectin isoform 1b2alpha
Status: REVIEWED
- Description
- Transcript Variant: This variant (14), also known as 1b2alpha, differs in the 5' UTR and the 5' coding region, and contains an additional in-frame coding exon compared to variant 1. The resulting protein (isoform 1b2alpha) contains a distinct N-terminus and contains a 5 aa internal protein segment compared to isoform 1c. This variant (14) contains the same 5' coding exon as variant 8 but also contains an alternate in-frame exon so the resulting protein contains a 5aa internal segment compared to isoform 1b.
- Source sequence(s)
-
AF188011, AI464512, AY480033, CN669707
- Consensus CDS
-
CCDS49645.1
- UniProtKB/TrEMBL
-
Q6S387
- Related
- ENSMUSP00000057158.8, ENSMUST00000054449.14
- Conserved Domains (10) summary
-
- smart00150
Location:524 → 618
- SPEC; Spectrin repeats
- smart00250
Location:3095 → 3131
- PLEC; Plectin repeat
- cd00014
Location:43 → 150
- CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
- cd00176
Location:620 → 798
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- pfam00307
Location:165 → 263
- CH; Calponin homology (CH) domain
- pfam00681
Location:2805 → 2846
- Plectin; Plectin repeat
- pfam01576
Location:1383 → 2570
- Myosin_tail_1; Myosin tail
- cd16269
Location:2334 → 2347
- GBP_C; coiled coil [structural motif]
- cl20817
Location:2183 → 2367
- GBP_C; Guanylate-binding protein, C-terminal domain
- cl21478
Location:1477 → 1600
- ATP-synt_B; ATP synthase B/B' CF(0)
-
NM_001164203.1 → NP_001157675.1 plectin isoform 1hij
See identical proteins and their annotated locations for NP_001157675.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (12), also known as 1j2alpha3alpha, contains an alternate 5' terminal exon and additional exons which result in a distinct 5' UTR and cause translation initiation at a downstream start codon compared to variant 1. The resulting protein (isoform 1hij) has a shorter N-terminus compared to isoform 1c. Variants 4, 5, 9 and 12 encode the same protein. Support for the use of the alternate downstream start codon can be found in PMID:14559777.
- Source sequence(s)
-
AC110211, AF188023, AY480037
- Consensus CDS
-
CCDS37117.2
- UniProtKB/TrEMBL
- E9Q3W4, Q6S390
- Related
- ENSMUSP00000079668.6, ENSMUST00000080857.12
- Conserved Domains (9) summary
-
- smart00150
Location:362 → 456
- SPEC; Spectrin repeats
- smart00250
Location:2933 → 2969
- PLEC; Plectin repeat
- cd00176
Location:458 → 636
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- pfam00307
Location:3 → 101
- CH; Calponin homology (CH) domain
- pfam00681
Location:2643 → 2684
- Plectin; Plectin repeat
- pfam01576
Location:1221 → 2408
- Myosin_tail_1; Myosin tail
- cd16269
Location:2172 → 2185
- GBP_C; coiled coil [structural motif]
- cl20817
Location:2088 → 2205
- GBP_C; Guanylate-binding protein, C-terminal domain
- cl21478
Location:1315 → 1438
- ATP-synt_B; ATP synthase B/B' CF(0)
-
NM_011117.2 → NP_035247.2 plectin isoform 1c
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) contains the 5'-most coding exon (exon 1c) and encodes isoform 1c.
- Source sequence(s)
-
AI464512, AY480033, CN669707
- UniProtKB/TrEMBL
-
Q6S392
- Conserved Domains (10) summary
-
- smart00150
Location:548 → 642
- SPEC; Spectrin repeats
- smart00250
Location:3119 → 3155
- PLEC; Plectin repeat
- cd00014
Location:72 → 174
- CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
- cd00176
Location:644 → 822
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- pfam00307
Location:189 → 287
- CH; Calponin homology (CH) domain
- pfam00681
Location:2829 → 2870
- Plectin; Plectin repeat
- pfam01576
Location:1407 → 2594
- Myosin_tail_1; Myosin tail
- cd16269
Location:2358 → 2371
- GBP_C; coiled coil [structural motif]
- cl20817
Location:2207 → 2391
- GBP_C; Guanylate-binding protein, C-terminal domain
- cl21478
Location:1501 → 1624
- ATP-synt_B; ATP synthase B/B' CF(0)
-
NM_201385.2 → NP_958787.2 plectin isoform 1f
Status: REVIEWED
- Description
- Transcript Variant: This variant (2), also known as 1f, differs in the 5' UTR and the 5' coding region compared to variant 1. The resulting protein (isoform 1f) contains a distinct N-terminus compared to isoform 1c.
- Source sequence(s)
-
AI464512, AY480034, CN669707
- Consensus CDS
-
CCDS37113.1
- UniProtKB/TrEMBL
-
Q6S393
- Related
- ENSMUSP00000074383.6, ENSMUST00000074834.12
- Conserved Domains (10) summary
-
- smart00150
Location:510 → 604
- SPEC; Spectrin repeats
- smart00250
Location:3081 → 3117
- PLEC; Plectin repeat
- cd00014
Location:34 → 136
- CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
- cd00176
Location:606 → 784
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- pfam00307
Location:151 → 249
- CH; Calponin homology (CH) domain
- pfam00681
Location:2791 → 2832
- Plectin; Plectin repeat
- pfam01576
Location:1369 → 2556
- Myosin_tail_1; Myosin tail
- cd16269
Location:2320 → 2333
- GBP_C; coiled coil [structural motif]
- cl20817
Location:2169 → 2353
- GBP_C; Guanylate-binding protein, C-terminal domain
- cl21478
Location:1463 → 1586
- ATP-synt_B; ATP synthase B/B' CF(0)
-
NM_201386.2 → NP_958788.2 plectin isoform 1e
Status: REVIEWED
- Description
- Transcript Variant: This variant (3), also known as 1e, differs in the 5' UTR and the 5' coding region compared to variant 1. The resulting protein (isoform 1e) contains a distinct N-terminus compared to isoform 1c.
- Source sequence(s)
-
AC110211, AY480035
- Consensus CDS
-
CCDS49648.1
- UniProtKB/TrEMBL
-
Q6S392
- Related
- ENSMUSP00000071765.6, ENSMUST00000071869.12
- Conserved Domains (10) summary
-
- smart00150
Location:497 → 591
- SPEC; Spectrin repeats
- smart00250
Location:3068 → 3104
- PLEC; Plectin repeat
- cd00014
Location:21 → 123
- CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
- cd00176
Location:593 → 771
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- pfam00307
Location:138 → 236
- CH; Calponin homology (CH) domain
- pfam00681
Location:2778 → 2819
- Plectin; Plectin repeat
- pfam01576
Location:1356 → 2543
- Myosin_tail_1; Myosin tail
- cd16269
Location:2307 → 2320
- GBP_C; coiled coil [structural motif]
- cl20817
Location:2156 → 2340
- GBP_C; Guanylate-binding protein, C-terminal domain
- cl21478
Location:1450 → 1573
- ATP-synt_B; ATP synthase B/B' CF(0)
-
NM_201387.3 → NP_958789.3 plectin isoform 1hij
See identical proteins and their annotated locations for NP_958789.3
Status: REVIEWED
- Description
- Transcript Variant: This variant (4), also known as 1i, contains an alternate 5' terminal exon which results in a distinct 5' UTR and causes translation initiation at a downstream start codon compared to variant 1. The resulting protein (isoform 1hij) has a shorter N-terminus compared to isoform 1c. Variants 4, 5, 9 and 12 encode the same protein. Support for the use of the alternate downstream start codon can be found in PMID:14559777.
- Source sequence(s)
-
AC110211, AY480036
- Consensus CDS
-
CCDS37117.2
- UniProtKB/TrEMBL
- E9Q3W4, Q6S390
- Related
- ENSMUSP00000129543.2, ENSMUST00000171562.8
- Conserved Domains (9) summary
-
- smart00150
Location:362 → 456
- SPEC; Spectrin repeats
- smart00250
Location:2933 → 2969
- PLEC; Plectin repeat
- cd00176
Location:458 → 636
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- pfam00307
Location:3 → 101
- CH; Calponin homology (CH) domain
- pfam00681
Location:2643 → 2684
- Plectin; Plectin repeat
- pfam01576
Location:1221 → 2408
- Myosin_tail_1; Myosin tail
- cd16269
Location:2172 → 2185
- GBP_C; coiled coil [structural motif]
- cl20817
Location:2088 → 2205
- GBP_C; Guanylate-binding protein, C-terminal domain
- cl21478
Location:1315 → 1438
- ATP-synt_B; ATP synthase B/B' CF(0)
-
NM_201388.2 → NP_958790.2 plectin isoform 1hij
See identical proteins and their annotated locations for NP_958790.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (5), also known as 1j, contains an alternate 5' terminal exon which results in a distinct 5' UTR and causes translation initiation at a downstream start codon compared to variant 1. The resulting protein (isoform 1hij) has a shorter N-terminus compared to isoform 1c. Variants 4, 5, 9 and 12 encode the same protein. Support for the use of the alternate downstream start codon can be found in PMID:14559777.
- Source sequence(s)
-
AC110211, AY480037
- Consensus CDS
-
CCDS37117.2
- UniProtKB/TrEMBL
- E9Q3W4, Q6S390
- Conserved Domains (9) summary
-
- smart00150
Location:362 → 456
- SPEC; Spectrin repeats
- smart00250
Location:2933 → 2969
- PLEC; Plectin repeat
- cd00176
Location:458 → 636
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- pfam00307
Location:3 → 101
- CH; Calponin homology (CH) domain
- pfam00681
Location:2643 → 2684
- Plectin; Plectin repeat
- pfam01576
Location:1221 → 2408
- Myosin_tail_1; Myosin tail
- cd16269
Location:2172 → 2185
- GBP_C; coiled coil [structural motif]
- cl20817
Location:2088 → 2205
- GBP_C; Guanylate-binding protein, C-terminal domain
- cl21478
Location:1315 → 1438
- ATP-synt_B; ATP synthase B/B' CF(0)
-
NM_201389.2 → NP_958791.2 plectin isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (6) differs in the 5' UTR and the 5' coding region compared to variant 1. The resulting protein (isoform 1) contains a distinct N-terminus compared to isoform 1c.
- Source sequence(s)
-
AI464512, AY480038, CN669707
- Consensus CDS
-
CCDS37114.1
- UniProtKB/TrEMBL
-
Q6S388
- Related
- ENSMUSP00000075772.6, ENSMUST00000076442.12
- Conserved Domains (12) summary
-
- smart00150
Location:662 → 756
- SPEC; Spectrin repeats
- smart00250
Location:3233 → 3269
- PLEC; Plectin repeat
- cd00014
Location:186 → 288
- CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
- cd00176
Location:758 → 936
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- pfam00307
Location:303 → 401
- CH; Calponin homology (CH) domain
- pfam00681
Location:2943 → 2984
- Plectin; Plectin repeat
- pfam01576
Location:1521 → 2708
- Myosin_tail_1; Myosin tail
- pfam03501
Location:7 → 101
- S10_plectin; Plectin/S10 domain
- cd16269
Location:2472 → 2485
- GBP_C; coiled coil [structural motif]
- cl02488
Location:1866 → 2041
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- cl20817
Location:2321 → 2505
- GBP_C; Guanylate-binding protein, C-terminal domain
- cl21478
Location:1615 → 1738
- ATP-synt_B; ATP synthase B/B' CF(0)
-
NM_201390.2 → NP_958792.2 plectin isoform 1d
Status: REVIEWED
- Description
- Transcript Variant: This variant (7), also known as 1d, differs in the 5' UTR and the 5' coding region compared to variant 1. The resulting protein (isoform 1d) contains a distinct N-terminus compared to isoform 1c.
- Source sequence(s)
-
AI464512, AY480039, CN669707
- Consensus CDS
-
CCDS49646.1
- UniProtKB/TrEMBL
-
Q6S388
- Related
- ENSMUSP00000126068.2, ENSMUST00000169108.8
- Conserved Domains (10) summary
-
- smart00150
Location:487 → 581
- SPEC; Spectrin repeats
- smart00250
Location:3058 → 3094
- PLEC; Plectin repeat
- cd00014
Location:11 → 113
- CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
- cd00176
Location:583 → 761
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- pfam00307
Location:128 → 226
- CH; Calponin homology (CH) domain
- pfam00681
Location:2768 → 2809
- Plectin; Plectin repeat
- pfam01576
Location:1346 → 2533
- Myosin_tail_1; Myosin tail
- cd16269
Location:2297 → 2310
- GBP_C; coiled coil [structural motif]
- cl20817
Location:2213 → 2330
- GBP_C; Guanylate-binding protein, C-terminal domain
- cl21478
Location:1440 → 1563
- ATP-synt_B; ATP synthase B/B' CF(0)
-
NM_201391.2 → NP_958793.2 plectin isoform 1b
Status: REVIEWED
- Description
- Transcript Variant: This variant (8), also known as 1b, differs in the 5' UTR and the 5' coding region compared to variant 1. The resulting protein (isoform 1b) contains a distinct N-terminus compared to isoform 1c. Plectin isoform 1b has been found to associate exclusively with mitochondria (PMID: 18541706, 14559777).
- Source sequence(s)
-
AI464512, AY480040, CN669707
- Consensus CDS
-
CCDS49644.1
- UniProtKB/TrEMBL
-
Q6S387
- Related
- ENSMUSP00000126526.2, ENSMUST00000169714.8
- Conserved Domains (10) summary
-
- smart00150
Location:519 → 613
- SPEC; Spectrin repeats
- smart00250
Location:3090 → 3126
- PLEC; Plectin repeat
- cd00014
Location:43 → 145
- CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
- cd00176
Location:615 → 793
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- pfam00307
Location:160 → 258
- CH; Calponin homology (CH) domain
- pfam00681
Location:2800 → 2841
- Plectin; Plectin repeat
- pfam01576
Location:1378 → 2565
- Myosin_tail_1; Myosin tail
- cd16269
Location:2329 → 2342
- GBP_C; coiled coil [structural motif]
- cl20817
Location:2178 → 2362
- GBP_C; Guanylate-binding protein, C-terminal domain
- cl21478
Location:1472 → 1595
- ATP-synt_B; ATP synthase B/B' CF(0)
-
NM_201392.2 → NP_958794.2 plectin isoform 1hij
See identical proteins and their annotated locations for NP_958794.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (9), also known as 1h, contains an alternate 5' terminal exon which results in a distinct 5' UTR and causes translation initiation at a downstream start codon compared to variant 1. The resulting protein (isoform 1hij) has a shorter N-terminus compared to isoform 1c. Variants 4, 5, 9 and 12 encode the same protein. Support for the use of the alternate downstream start codon can be found in PMID:14559777.
- Source sequence(s)
-
AC110211, AY480041
- Consensus CDS
-
CCDS37117.2
- UniProtKB/TrEMBL
- E9Q3W4, Q6S390
- Related
- ENSMUSP00000127261.2, ENSMUST00000169438.8
- Conserved Domains (9) summary
-
- smart00150
Location:362 → 456
- SPEC; Spectrin repeats
- smart00250
Location:2933 → 2969
- PLEC; Plectin repeat
- cd00176
Location:458 → 636
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- pfam00307
Location:3 → 101
- CH; Calponin homology (CH) domain
- pfam00681
Location:2643 → 2684
- Plectin; Plectin repeat
- pfam01576
Location:1221 → 2408
- Myosin_tail_1; Myosin tail
- cd16269
Location:2172 → 2185
- GBP_C; coiled coil [structural motif]
- cl20817
Location:2088 → 2205
- GBP_C; Guanylate-binding protein, C-terminal domain
- cl21478
Location:1315 → 1438
- ATP-synt_B; ATP synthase B/B' CF(0)
-
NM_201393.2 → NP_958795.2 plectin isoform 1g
Status: REVIEWED
- Description
- Transcript Variant: This variant (10), also known as 1g, differs in the 5' UTR and the 5' coding region compared to variant 1. The resulting protein (isoform 1g) contains a distinct N-terminus compared to isoform 1c.
- Source sequence(s)
-
AI464512, AY480042, CN669707
- Consensus CDS
-
CCDS37115.1
- UniProtKB/TrEMBL
-
Q6S385
- Related
- ENSMUSP00000072478.5, ENSMUST00000072692.11
- Conserved Domains (10) summary
-
- smart00150
Location:526 → 620
- SPEC; Spectrin repeats
- smart00250
Location:3097 → 3133
- PLEC; Plectin repeat
- cd00014
Location:50 → 152
- CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
- cd00176
Location:622 → 800
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- pfam00307
Location:167 → 265
- CH; Calponin homology (CH) domain
- pfam00681
Location:2807 → 2848
- Plectin; Plectin repeat
- pfam01576
Location:1385 → 2572
- Myosin_tail_1; Myosin tail
- cd16269
Location:2336 → 2349
- GBP_C; coiled coil [structural motif]
- cl20817
Location:2185 → 2369
- GBP_C; Guanylate-binding protein, C-terminal domain
- cl21478
Location:1479 → 1602
- ATP-synt_B; ATP synthase B/B' CF(0)
-
NM_201394.2 → NP_958796.2 plectin isoform 1a
Status: REVIEWED
- Description
- Transcript Variant: This variant (11), also known as 1a, differs in the 5' UTR and the 5' coding region compared to variant 1. The resulting protein (isoform 1a) contains a distinct N-terminus compared to isoform 1c.
- Source sequence(s)
-
AI464512, AY480043, CN669707
- Consensus CDS
-
CCDS37116.1
- UniProtKB/TrEMBL
-
Q6S388
- Related
- ENSMUSP00000023226.7, ENSMUST00000023226.13
- Conserved Domains (10) summary
-
- smart00150
Location:519 → 613
- SPEC; Spectrin repeats
- smart00250
Location:3090 → 3126
- PLEC; Plectin repeat
- cd00014
Location:43 → 145
- CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
- cd00176
Location:615 → 793
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- pfam00307
Location:160 → 258
- CH; Calponin homology (CH) domain
- pfam00681
Location:2800 → 2841
- Plectin; Plectin repeat
- pfam01576
Location:1378 → 2565
- Myosin_tail_1; Myosin tail
- cd16269
Location:2329 → 2342
- GBP_C; coiled coil [structural motif]
- cl20817
Location:2178 → 2362
- GBP_C; Guanylate-binding protein, C-terminal domain
- cl21478
Location:1472 → 1595
- ATP-synt_B; ATP synthase B/B' CF(0)
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000081.7 Reference GRCm39 C57BL/6J
- Range
-
76055174..76115578 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NR_028117.1: Suppressed sequence
- Description
- NR_028117.1: This RefSeq was permanently suppressed because there is support for the transcript as protein coding.