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Or8d1 olfactory receptor family 8 subfamily D member 1 [ Mus musculus (house mouse) ]

Gene ID: 18324, updated on 11-Apr-2024

Summary

Official Symbol
Or8d1provided by MGI
Official Full Name
olfactory receptor family 8 subfamily D member 1provided by MGI
Primary source
MGI:MGI:109309
See related
Ensembl:ENSMUSG00000047667 AllianceGenome:MGI:109309
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Olfr26; MTPCR09; MOR171-9
Summary
Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
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Genomic context

See Or8d1 in Genome Data Viewer
Location:
9 A5.1; 9 20.92 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (38766356..38767286)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (38855060..38855990)

Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene olfactory receptor family 8 subfamily B member 56 Neighboring gene STARR-seq mESC enhancer starr_23829 Neighboring gene STARR-seq mESC enhancer starr_23830 Neighboring gene olfactory receptor family 8 subfamily D member 2 Neighboring gene olfactory receptor family 8 subfamily D member 22, pseudogene 1 Neighboring gene STARR-seq mESC enhancer starr_23831 Neighboring gene olfactory receptor family 8 subfamily D member 2D

Genomic regions, transcripts, and products

Pathways from PubChem

General gene information

Markers

Clone Names

  • MGC161287

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables odorant binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables olfactory receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables olfactory receptor activity ISA
Inferred from Sequence Alignment
more info
PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within G protein-coupled receptor signaling pathway ISA
Inferred from Sequence Alignment
more info
PubMed 
involved_in sensory perception of smell IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within sensory perception of smell ISA
Inferred from Sequence Alignment
more info
PubMed 
Component Evidence Code Pubs
located_in membrane ISA
Inferred from Sequence Alignment
more info
PubMed 

General protein information

Preferred Names
olfactory receptor 26
Names
GA_x6K02T2PVTD-32550930-32551856
olfactory receptor MOR171-9

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_146783.2NP_666994.2  olfactory receptor 26

    See identical proteins and their annotated locations for NP_666994.2

    Status: VALIDATED

    Source sequence(s)
    CT025680
    Consensus CDS
    CCDS23030.1
    UniProtKB/TrEMBL
    Q7TRB7, Q8VG52
    Related
    ENSMUSP00000100467.3, ENSMUST00000104874.3
    Conserved Domains (2) summary
    pfam00001
    Location:41290
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:34305
    7tm_4; Olfactory receptor

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000075.7 Reference GRCm39 C57BL/6J

    Range
    38766356..38767286
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)