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eef-1G putative elongation factor 1-gamma [ Caenorhabditis elegans ]

Gene ID: 179522, updated on 5-May-2024

Summary

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Gene symbol
eef-1G
Gene description
putative elongation factor 1-gamma
Primary source
WormBase:WBGene00008920
Locus tag
CELE_F17C11.9
See related
AllianceGenome:WB:WBGene00008920
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable translation elongation factor activity. Predicted to be involved in translational elongation. Predicted to be active in cytoplasm and nucleus. Orthologous to human EEF1G (eukaryotic translation elongation factor 1 gamma). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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Location:
chromosome: V
Exon count:
6
Sequence:
Chromosome: V; NC_003283.11 (10965719..10967922)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Minichromosome loss protein Mcl1 middle region domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene protein of unknown function DB domain-containing protein Neighboring gene ncRNA Neighboring gene C6 domain-containing protein;ShKT domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative proteomic analysis reveals differentially expressed proteins in Caenorhabditis elegans pgl-1 mutants grown at 20°C and 25°C. Tohsato Y, et al. J Proteomics, 2012 Aug 3. PMID 22579749
  2. The Caenorhabditis elegans Protein FIC-1 Is an AMPylase That Covalently Modifies Heat-Shock 70 Family Proteins, Translation Elongation Factors and Histones. Truttmann MC, et al. PLoS Genet, 2016 May. PMID 27138431, Free PMC Article
  3. Misexpression of the Caenorhabditis elegans miRNA let-7 is sufficient to drive developmental programs. Hayes GD, et al. Cold Spring Harb Symp Quant Biol, 2006. PMID 17381276
  4. Analysis of acidic peptides with a matrix-assisted laser desorption/ionization mass spectrometry using positive and negative ion modes with additive monoammonium phosphate. Nabetani T, et al. Proteomics, 2006 Aug. PMID 16897684
  5. A Sterile 20 Family Kinase and Its Co-factor CCM-3 Regulate Contractile Ring Proteins on Germline Intercellular Bridges. Rehain-Bell K, et al. Curr Biol, 2017 Mar 20. PMID 28285996, Free PMC Article

See all (18) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables translation elongation factor activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
  
involved_in translational elongation IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in translational elongation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
putative elongation factor 1-gamma
NP_001041100.1
  • Confirmed by transcript evidence
NP_001379321.1
  • Partially confirmed by transcript evidence
NP_505800.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    10965719..10967922
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_073399.7 → NP_505800.1  putative elongation factor 1-gamma [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_505800.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P54412, Q2PJ76, Q8I4K9
    Conserved Domains (4) summary
    cd03181
    Location:71 → 188
    GST_C_EF1Bgamma_like; Glutathione S-transferase C-terminal-like, alpha helical domain of the Gamma subunit of Elongation Factor 1B and similar proteins
    COG0625
    Location:4 → 181
    GstA; Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
    cd03044
    Location:3 → 77
    GST_N_EF1Bgamma; GST_N family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of ...
    pfam00647
    Location:238 → 343
    EF1G; Elongation factor 1 gamma, conserved domain

  2. NM_001392606.1 → NP_001379321.1  putative elongation factor 1-gamma [Caenorhabditis elegans]

    Status: REVIEWED

    Conserved Domains (2) summary
    cd03181
    Location:46 → 163
    GST_C_EF1Bgamma_like; Glutathione S-transferase C-terminal-like, alpha helical domain of the Gamma subunit of Elongation Factor 1B and similar proteins
    pfam00647
    Location:215 → 318
    EF1G; Elongation factor 1 gamma, conserved domain

  3. NM_001047635.7 → NP_001041100.1  putative elongation factor 1-gamma [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001041100.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P54412
    Conserved Domains (3) summary
    cd03044
    Location:3 → 77
    GST_N_EF1Bgamma; GST_N family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of ...
    pfam00647
    Location:205 → 310
    EF1G; Elongation factor 1 gamma, conserved domain
    cl02776
    Location:71 → 155
    GST_C_family; C-terminal, alpha helical domain of the Glutathione S-transferase family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P54412.1

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