ribo-1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 [Caenorhabditis elegans] - Gene

Summary

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Gene symbol: ribo-1
Gene description: Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1
Primary source: WormBase:WBGene00020683
Locus tag: CELE_T22D1.4
See related: AllianceGenome:WB:WBGene00020683
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Caenorhabditis elegans (strain: Bristol N2)
Lineage: Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary: Predicted to be involved in protein N-linked glycosylation via asparagine. Predicted to be located in endoplasmic reticulum membrane. Predicted to be integral component of membrane. Predicted to be part of oligosaccharyltransferase complex. Orthologous to human RPN1 (ribophorin I). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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See ribo-1 in Genome Data Viewer

Location:: chromosome: IV

Exon count:: 4

Sequence:: Chromosome: IV; NC_003282.8 (6910683..6912865)

Chromosome IV - NC_003282.8 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

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Pathways from PubChem

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

T22D1.4 (e-PCR)
- UniSTS:310952

Homology

Orthologs from OrthoDB

Gene Ontology Provided by WormBase

Process	Evidence Code	Pubs
involved_in protein N-linked glycosylation via asparagine	IBA Inferred from Biological aspect of Ancestor more info
involved_in protein glycosylation	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in endoplasmic reticulum	IEA Inferred from Electronic Annotation more info
located_in endoplasmic reticulum membrane	IEA Inferred from Electronic Annotation more info
located_in membrane	IEA Inferred from Electronic Annotation more info
part_of oligosaccharyltransferase complex	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1

NP_501065.2

Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003282.8 Reference assembly

Range

6910683..6912865

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_068664.7 → NP_501065.2 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 [Caenorhabditis elegans]

See identical proteins and their annotated locations for NP_501065.2

Status: REVIEWED

UniProtKB/Swiss-Prot

Q9GZH4

Conserved Domains (1) summary

pfam04597
Location:23 → 422

Ribophorin_I; Ribophorin I