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Mpl myeloproliferative leukemia virus oncogene [ Mus musculus (house mouse) ]

Gene ID: 17480, updated on 21-Apr-2024

Summary

Official Symbol
Mplprovided by MGI
Official Full Name
myeloproliferative leukemia virus oncogeneprovided by MGI
Primary source
MGI:MGI:97076
See related
Ensembl:ENSMUSG00000006389 AllianceGenome:MGI:97076
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
CD110; TPO-R; c-mpl; hlb219
Summary
Predicted to enable thrombopoietin receptor activity. Involved in thrombopoietin-mediated signaling pathway. Acts upstream of or within several processes, including hemopoiesis; regulation of gene expression; and regulation of stem cell division. Predicted to be located in several cellular components, including Golgi apparatus; neuronal cell body; and nuclear membrane. Is expressed in several structures, including brain; hemolymphoid system; mesenchyme derived from splanchnopleure; reproductive system; and spinal cord. Used to study congenital amegakaryocytic thrombocytopenia. Human ortholog(s) of this gene implicated in congenital amegakaryocytic thrombocytopenia; essential thrombocythemia; myelofibrosis; thrombocytopenia; and thrombocytosis. Orthologous to human MPL (MPL proto-oncogene, thrombopoietin receptor). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in spleen adult (RPKM 4.4), liver E14.5 (RPKM 3.8) and 7 other tissues See more
Orthologs
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Genomic context

Location:
4 D2.1; 4 54.61 cM
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (118299609..118314771, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (118442412..118457688, complement)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E1281 Neighboring gene mediator complex subunit 8 Neighboring gene ELOVL fatty acid elongase 1 Neighboring gene STARR-positive B cell enhancer ABC_E6202 Neighboring gene cell division cycle 20 Neighboring gene tyrosine kinase with immunoglobulin-like and EGF-like domains 1 Neighboring gene predicted gene 12859

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (5)  1 citation
  • Chemically induced (ENU) (1) 
  • Endonuclease-mediated (5) 

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables cytokine receptor activity IEA
Inferred from Electronic Annotation
more info
 
enables thrombopoietin receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables thrombopoietin receptor activity ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
involved_in basophil homeostasis ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within definitive hemopoiesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in eosinophil homeostasis ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within homeostasis of number of cells IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in immunoglobulin mediated immune response IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in monocyte homeostasis ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within negative regulation of apoptotic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in neutrophil homeostasis ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within platelet formation IGI
Inferred from Genetic Interaction
more info
PubMed 
acts_upstream_of_or_within positive regulation of gene expression IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of lymphocyte proliferation ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of platelet formation ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within regulation of chemokine production IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within regulation of stem cell division IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within regulation of stem cell proliferation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in thrombopoietin-mediated signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in thrombopoietin-mediated signaling pathway IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus ISO
Inferred from Sequence Orthology
more info
 
located_in cell surface ISO
Inferred from Sequence Orthology
more info
 
is_active_in external side of plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in neuronal cell body ISO
Inferred from Sequence Orthology
more info
 
located_in nuclear membrane ISO
Inferred from Sequence Orthology
more info
 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
thrombopoietin receptor
Names
myeloproliferative leukemia protein
proto-oncogene c-Mpl

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001122949.3NP_001116421.1  thrombopoietin receptor isoform 1 precursor

    See identical proteins and their annotated locations for NP_001116421.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1, also known as c-mpl-I).
    Source sequence(s)
    AL627212
    Consensus CDS
    CCDS51284.1
    UniProtKB/TrEMBL
    A2A9D4, Q3ZB68
    Related
    ENSMUSP00000006556.5, ENSMUST00000006556.11
    Conserved Domains (2) summary
    cd00063
    Location:395484
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam09067
    Location:25128
    EpoR_lig-bind; Erythropoietin receptor, ligand binding
  2. NM_001285496.2NP_001272425.1  thrombopoietin receptor isoform 3 precursor

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) uses an alternate in-frame splice site in the 5' coding region, compared to variant 1, resulting in an isoform (3, also known as c-mpl-II) that is shorter than isoform 1.
    Source sequence(s)
    AL627212
    UniProtKB/TrEMBL
    Q925F5
    Related
    ENSMUSP00000101983.2, ENSMUST00000106375.2
    Conserved Domains (2) summary
    cd00063
    Location:335424
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam09067
    Location:25128
    EpoR_lig-bind; Erythropoietin receptor, ligand binding
  3. NM_001285497.2NP_001272426.1  thrombopoietin receptor isoform 4 precursor

    Status: VALIDATED

    Description
    Transcript Variant: This variant (4) lacks two alternate exons, which results in a frameshift in the 3' coding region, compared to variant 1. The encoded isoform (4) has a distinct C-terminus and is shorter than isoform 1.
    Source sequence(s)
    AL627212
    UniProtKB/TrEMBL
    E9Q7U5
    Related
    ENSMUSP00000130167.3, ENSMUST00000168404.9
    Conserved Domains (1) summary
    pfam09067
    Location:25128
    EpoR_lig-bind; Erythropoietin receptor, ligand binding
  4. NM_010823.4NP_034953.2  thrombopoietin receptor isoform 2 precursor

    See identical proteins and their annotated locations for NP_034953.2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) uses an alternate in-frame splice site in the 5' coding region, compared to variant 1, resulting in an isoform (2) that is shorter than isoform 1.
    Source sequence(s)
    AL627212
    Consensus CDS
    CCDS18552.1
    UniProtKB/Swiss-Prot
    A6H8H6, Q08351, Q8BRX0
    UniProtKB/TrEMBL
    Q3ZB69
    Related
    ENSMUSP00000099732.4, ENSMUST00000102671.10
    Conserved Domains (2) summary
    cd00063
    Location:387476
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam09067
    Location:25128
    EpoR_lig-bind; Erythropoietin receptor, ligand binding

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    118299609..118314771 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011240468.3XP_011238770.1  thrombopoietin receptor isoform X1

    Conserved Domains (1) summary
    cd00063
    Location:114203
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

RNA

  1. XR_004941829.1 RNA Sequence