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cwn-1 Protein Wnt-1 [ Caenorhabditis elegans ]

Gene ID: 173399, updated on 23-Nov-2023

Summary

Gene symbol
cwn-1
Gene description
Protein Wnt-1
Primary source
WormBase:WBGene00000857
Locus tag
CELE_K10B4.6
See related
AllianceGenome:WB:WBGene00000857
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Enables receptor tyrosine kinase binding activity. Involved in several processes, including neuroblast migration; neuron migration; and positive regulation of cellular component movement. Predicted to be located in cytoplasm; extracellular region; and plasma membrane. Predicted to be active in extracellular space. Is expressed in several structures, including CAN; hypodermal cell; intestine; muscle cell; and somatic nervous system. Human ortholog(s) of this gene implicated in Fuhrmann syndrome; Mullerian aplasia and hyperandrogenism; Schinzel type phocomelia; and congenital diarrhea. Orthologous to several human genes including WNT4 (Wnt family member 4). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

Location:
chromosome: II
Exon count:
8
Sequence:
Chromosome: II; NC_003280.10 (130983..133598, complement)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Serpentine receptor class delta-3 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Peroxidase

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables cytokine activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables frizzled binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables frizzled binding ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
enables receptor ligand activity ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
enables receptor tyrosine kinase binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables signaling receptor binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in Wnt signaling pathway ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
involved_in canonical Wnt signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in cell fate commitment IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in cell fate specification IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in generation of neurons IEA
Inferred from Electronic Annotation
more info
 
involved_in interneuron migration IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in interneuron migration IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in motor neuron migration IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in motor neuron migration IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in multicellular organism development IEA
Inferred from Electronic Annotation
more info
 
involved_in nervous system development IEA
Inferred from Electronic Annotation
more info
 
involved_in neuroblast migration IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in neuroblast migration IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in neuron differentiation IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in neuron migration IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in neuron migration IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of anterior/posterior axon guidance IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in positive regulation of motor neuron migration IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in positive regulation of sensory neuron axon guidance IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in regulation of gene expression IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in regulation of gene expression IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in regulation of vulval development IGI
Inferred from Genetic Interaction
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
Protein Wnt-1
NP_493668.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    130983..133598 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_061267.5NP_493668.1  Protein Wnt-1 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_493668.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P34888
    Conserved Domains (1) summary
    smart00097
    Location:44372
    WNT1; found in Wnt-1

RNA

  1. NR_132572.1 RNA Sequence

    Status: REVIEWED