rpl-30 Large ribosomal subunit protein eL30 [Caenorhabditis elegans] - Gene

Summary

Go to the top of the page Help

Gene symbol: rpl-30
Gene description: Large ribosomal subunit protein eL30
Primary source: WormBase:WBGene00004444
Locus tag: CELE_Y106G6H.3
See related: AllianceGenome:WB:WBGene00004444
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Caenorhabditis elegans (strain: Bristol N2)
Lineage: Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary: Predicted to enable RNA binding activity. Predicted to be a structural constituent of ribosome. Involved in determination of adult lifespan. Predicted to be located in ribosome. Predicted to be part of cytosolic large ribosomal subunit. Human ortholog(s) of this gene implicated in herpes simplex. Orthologous to human RPL30 (ribosomal protein L30). [provided by Alliance of Genome Resources, Apr 2022]
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help

Location:: chromosome: I

Exon count:: 4

Sequence:: Chromosome: I; NC_003279.8 (10436254..10436884)

Chromosome I - NC_003279.8 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:: NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

Pathways from PubChem

Go to the top of the page

Interactions

Go to the top of the page Help

Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

Go to the top of the page Help

Markers

Y106G6H.3 (e-PCR)
- UniSTS:322447

Homology

Orthologs from OrthoDB

Gene Ontology Provided by WormBase

Function	Evidence Code	Pubs
enables RNA binding	IBA Inferred from Biological aspect of Ancestor more info
enables RNA binding	IEA Inferred from Electronic Annotation more info
enables structural constituent of ribosome	IBA Inferred from Biological aspect of Ancestor more info

Process	Evidence Code	Pubs
involved_in determination of adult lifespan	IMP Inferred from Mutant Phenotype more info	PubMed

Component	Evidence Code	Pubs
part_of cytosolic large ribosomal subunit	IBA Inferred from Biological aspect of Ancestor more info
part_of ribonucleoprotein complex	IEA Inferred from Electronic Annotation more info
located_in ribosome	IEA Inferred from Electronic Annotation more info

General protein information

Go to the top of the page Help

Preferred Names: Large ribosomal subunit protein eL30

NP_001380121.1

Confirmed by transcript evidence

NP_492728.2

Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003279.8 Reference assembly

Range

10436254..10436884

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_001392932.1 → NP_001380121.1 Large ribosomal subunit protein eL30 [Caenorhabditis elegans]

Status: REVIEWED

UniProtKB/TrEMBL

I2HAJ2

Conserved Domains (1) summary

PTZ00106
Location:1 → 89

PTZ00106; 60S ribosomal protein L30; Provisional
NM_060327.8 → NP_492728.2 Large ribosomal subunit protein eL30 [Caenorhabditis elegans]

See identical proteins and their annotated locations for NP_492728.2

Status: REVIEWED

UniProtKB/TrEMBL

Q9XWS4

Conserved Domains (1) summary

PTZ00106
Location:4 → 110

PTZ00106; 60S ribosomal protein L30; Provisional