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Max Max protein [ Mus musculus (house mouse) ]

Gene ID: 17187, updated on 10-Mar-2024

Summary

Official Symbol
Maxprovided by MGI
Official Full Name
Max proteinprovided by MGI
Primary source
MGI:MGI:96921
See related
Ensembl:ENSMUSG00000059436 AllianceGenome:MGI:96921
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
bHLHd4; bHLHd5; bHLHd6; bHLHd7; bHLHd8
Summary
Enables RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in positive regulation of transcription by RNA polymerase II. Acts upstream of or within regulation of transcription, DNA-templated. Located in nucleus. Is expressed in several structures, including early conceptus; genitourinary system; lens; limb cartilage condensation; and liver. Human ortholog(s) of this gene implicated in lung small cell carcinoma and pheochromocytoma. Orthologous to human MAX (MYC associated factor X). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in large intestine adult (RPKM 24.2), small intestine adult (RPKM 21.0) and 28 other tissues See more
Orthologs
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Genomic context

Location:
12 C3; 12 33.78 cM
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (76984045..77009123, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (76937269..76962323, complement)

Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene farnesyltransferase, CAAX box, beta Neighboring gene predicted gene, 46357 Neighboring gene predicted gene, 46358 Neighboring gene STARR-seq mESC enhancer starr_32542 Neighboring gene STARR-positive B cell enhancer ABC_E3056 Neighboring gene STARR-seq mESC enhancer starr_32548 Neighboring gene predicted gene, 35041 Neighboring gene CapStarr-seq enhancer MGSCv37_chr12:78140672-78140781 Neighboring gene predicted gene, 35189

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2)  1 citation
  • Endonuclease-mediated (2) 

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables DNA binding IDA
Inferred from Direct Assay
more info
PubMed 
enables DNA binding ISO
Inferred from Sequence Orthology
more info
 
enables DNA-binding transcription factor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables DNA-binding transcription factor activity ISO
Inferred from Sequence Orthology
more info
 
enables DNA-binding transcription factor activity, RNA polymerase II-specific ISO
Inferred from Sequence Orthology
more info
 
enables DNA-binding transcription factor binding ISO
Inferred from Sequence Orthology
more info
 
contributes_to DNA-binding transcription repressor activity, RNA polymerase II-specific ISO
Inferred from Sequence Orthology
more info
 
enables DNA-binding transcription repressor activity, RNA polymerase II-specific ISO
Inferred from Sequence Orthology
more info
 
enables E-box binding ISO
Inferred from Sequence Orthology
more info
 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IDA
Inferred from Direct Assay
more info
PubMed 
contributes_to RNA polymerase II transcription regulatory region sequence-specific DNA binding ISO
Inferred from Sequence Orthology
more info
 
enables identical protein binding ISO
Inferred from Sequence Orthology
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 
enables protein-containing complex binding ISO
Inferred from Sequence Orthology
more info
 
enables sequence-specific DNA binding ISO
Inferred from Sequence Orthology
more info
 
enables sequence-specific double-stranded DNA binding ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
part_of MLL1 complex ISO
Inferred from Sequence Orthology
more info
 
part_of Mad-Max complex ISO
Inferred from Sequence Orthology
more info
 
part_of Myc-Max complex IPI
Inferred from Physical Interaction
more info
PubMed 
part_of Myc-Max complex ISO
Inferred from Sequence Orthology
more info
 
located_in PML body ISO
Inferred from Sequence Orthology
more info
 
part_of RNA polymerase II transcription regulator complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of RNA polymerase II transcription regulator complex ISO
Inferred from Sequence Orthology
more info
 
located_in cell projection IEA
Inferred from Electronic Annotation
more info
 
part_of chromatin ISO
Inferred from Sequence Orthology
more info
 
located_in dendrite ISO
Inferred from Sequence Orthology
more info
 
located_in nucleus IDA
Inferred from Direct Assay
more info
PubMed 
located_in nucleus ISO
Inferred from Sequence Orthology
more info
 
part_of protein-DNA complex ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
protein max
Names
myc-associated factor X
myc-binding novel HLH/LZ protein
protein myn

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001146176.2NP_001139648.1  protein max isoform 2

    See identical proteins and their annotated locations for NP_001139648.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks an exon in the 5' coding region compared to variant 1 but maintains the reading frame. The encoded protein (isoform 2) is shorter but has the same N- and C-termini compared to isoform 1.
    Source sequence(s)
    AC124556
    Consensus CDS
    CCDS49094.1
    UniProtKB/TrEMBL
    Q8C4Y1
    Related
    ENSMUSP00000080778.6, ENSMUST00000082136.7
    Conserved Domains (1) summary
    cd11406
    Location:1583
    bHLHzip_Max; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in protein Max and similar proteins
  2. NM_001361663.2NP_001348592.1  protein max isoform 3

    Status: VALIDATED

    Source sequence(s)
    AC124556
    Conserved Domains (1) summary
    cd11406
    Location:2492
    bHLHzip_Max; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in protein Max and similar proteins
  3. NM_001361664.2NP_001348593.1  protein max isoform 4

    Status: VALIDATED

    Source sequence(s)
    AC124556
  4. NM_001422052.1NP_001408981.1  protein max isoform 5

    Status: VALIDATED

    Source sequence(s)
    AC124556
    UniProtKB/TrEMBL
    A0A1W2P7P4
  5. NM_001422053.1NP_001408982.1  protein max isoform 4

    Status: VALIDATED

    Source sequence(s)
    AC124556
  6. NM_008558.3NP_032584.2  protein max isoform 1

    See identical proteins and their annotated locations for NP_032584.2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) encodes the longest isoform (1).
    Source sequence(s)
    AC124556
    Consensus CDS
    CCDS36479.1
    UniProtKB/Swiss-Prot
    B2RS19, P28574, Q8C4Y1
    Related
    ENSMUSP00000106025.4, ENSMUST00000110395.11
    Conserved Domains (1) summary
    cd11406
    Location:2492
    bHLHzip_Max; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in protein Max and similar proteins

RNA

  1. NR_185481.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC124556

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000078.7 Reference GRCm39 C57BL/6J

    Range
    76984045..77009123 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036157209.1XP_036013102.1  protein max isoform X2

  2. XM_030246570.2XP_030102430.1  protein max isoform X2

  3. XM_030246571.1XP_030102431.1  protein max isoform X2

RNA

  1. XR_872708.4 RNA Sequence