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Ilf3 interleukin enhancer binding factor 3 [ Mus musculus (house mouse) ]

Gene ID: 16201, updated on 10-Mar-2024

Summary

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Official Symbol
Ilf3provided by MGI
Official Full Name
interleukin enhancer binding factor 3provided by MGI
Primary source
MGI:MGI:1339973
See related
Ensembl:ENSMUSG00000032178 AllianceGenome:MGI:1339973
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
NF90; NFAR; MBII-26; MPHOSPH4
Summary
The protein encoded by this gene contains two double-stranded RNA binding domains and functions in the post-transcriptional regulation of gene expression. It is a component of an RNA-protein complex that may be involved in mediating the export of messenger RNAs. Alternative splicing results in multiple transcript variants encoding distinct isoforms. These isoforms are grouped into two categories, NFAR-1 or NFAR-2, based on variation at the C-terminus. [provided by RefSeq, Mar 2013]
Expression
Ubiquitous expression in CNS E11.5 (RPKM 26.3), CNS E14 (RPKM 23.6) and 28 other tissues See more
Orthologs
human all
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Genomic context

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Location:
9 A3; 9 7.78 cM
Exon count:
24
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (21278964..21316659)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (21367731..21405363)

Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene adaptor protein complex AP-1, mu 2 subunit Neighboring gene CapStarr-seq enhancer MGSCv37_chr9:21125421-21125608 Neighboring gene CapStarr-seq enhancer MGSCv37_chr9:21132507-21132711 Neighboring gene CapStarr-seq enhancer MGSCv37_chr9:21136702-21136885 Neighboring gene predicted gene, 39302 Neighboring gene solute carrier family 44, member 2 Neighboring gene predicted gene, 36198 Neighboring gene STARR-positive B cell enhancer ABC_E2284 Neighboring gene predicted gene, 16853 Neighboring gene STARR-positive B cell enhancer ABC_E134 Neighboring gene queuine tRNA-ribosyltransferase catalytic subunit 1 Neighboring gene CapStarr-seq enhancer MGSCv37_chr9:21240723-21240906 Neighboring gene dynamin 2 Neighboring gene CapStarr-seq enhancer MGSCv37_chr9:21254333-21254586 Neighboring gene predicted gene, 46104

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. ILF3 prion-like domain regulates gene expression and fear memory under chronic stress. Yamashita A, et al. iScience, 2023 Mar 17. PMID 36876121, Free PMC Article
  2. Proteomic analysis of interleukin enhancer binding factor 3 (Ilf3) and nuclear factor 90 (NF90) interactome. Chaumet A, et al. Biochimie, 2013 Jun. PMID 23321469
  3. High expression of nuclear factor 90 (NF90) leads to mitochondrial degradation in skeletal and cardiac muscles. Higuchi T, et al. PLoS One, 2012. PMID 22912857, Free PMC Article
  4. The NFAR's (nuclear factors associated with dsRNA): evolutionarily conserved members of the dsRNA binding protein family. Barber GN. RNA Biol, 2009 Jan-Mar. PMID 19106622
  5. Identification of a newly spliced exon in the mouse Ilf3 gene generating two long and short isoforms of Ilf3 and NF90. Viranaicken W, et al. Genomics, 2006 Nov. PMID 16952437

See all (74) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Role of ATF3 triggering M2 macrophage polarization to protect against the inflammatory injury of sepsis through ILF3/NEAT1 axis.
    Title: Role of ATF3 triggering M2 macrophage polarization to protect against the inflammatory injury of sepsis through ILF3/NEAT1 axis.
  2. Genome-wide CRISPR screens identify ILF3 as a mediator of mTORC1-dependent amino acid sensing.
    Title: Genome-wide CRISPR screens identify ILF3 as a mediator of mTORC1-dependent amino acid sensing.
  3. NF90-NF45 is essential for beta cell compensation under obesity-inducing metabolic stress through suppression of p53 signaling pathway.
    Title: NF90-NF45 is essential for β cell compensation under obesity-inducing metabolic stress through suppression of p53 signaling pathway.
  4. ILF3 is responsible for hyperlipidemia-induced arteriosclerotic calcification by mediating BMP2 and STAT1 transcription.
    Title: ILF3 is responsible for hyperlipidemia-induced arteriosclerotic calcification by mediating BMP2 and STAT1 transcription.
  5. Ubiquitination and degradation of NF90 by Tim-3 inhibits antiviral innate immunity.
    Title: Ubiquitination and degradation of NF90 by Tim-3 inhibits antiviral innate immunity.
  6. Data support a model in which NF45, NF90, and NF110 operate in feedback loops that enable them, through both overlapping and independent targets, to help balance the push and pull of pluripotency and differentiation cues.
    Title: NF45 and NF90/NF110 coordinately regulate ESC pluripotency and differentiation.
  7. Reduction in the expression of YBX1 and ILF3 controls the expression of pluripotency-related genes in ESCs, suggesting their roles in further regulation of the pluripotent state of ESCs.
    Title: Nanog RNA-binding proteins YBX1 and ILF3 affect pluripotency of embryonic stem cells.
  8. NF90-NF45 complex induces centronuclear myopathy through increased dynamin 2 expression by an NF90-NF45-induced reduction of miR-133a expression in vivo.
    Title: Overexpression of NF90-NF45 Represses Myogenic MicroRNA Biogenesis, Resulting in Development of Skeletal Muscle Atrophy and Centronuclear Muscle Fibers.
  9. This work allows to establish a link between Ilf3 and NF90 functions, as RNA binding proteins, and their interacting partners implicated in these functions.
    Title: Proteomic analysis of interleukin enhancer binding factor 3 (Ilf3) and nuclear factor 90 (NF90) interactome.
  10. High expression of nuclear factor 90 leads to mitochondrial degradation in skeletal and cardiac muscles through a negative regulation of ribosomes via interaction with ribosomal factors.
    Title: High expression of nuclear factor 90 (NF90) leads to mitochondrial degradation in skeletal and cardiac muscles.
Submit: New GeneRIF Correction See all GeneRIFs (16)

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables DNA binding ISO
Inferred from Sequence Orthology
more info
  
enables DNA binding TAS
Traceable Author Statement
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
  
enables double-stranded RNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables double-stranded RNA binding ISO
Inferred from Sequence Orthology
more info
  
enables enzyme binding ISO
Inferred from Sequence Orthology
more info
  
enables mRNA 3'-UTR AU-rich region binding ISO
Inferred from Sequence Orthology
more info
  
enables single-stranded RNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables virus receptor activity ISO
Inferred from Sequence Orthology
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within defense response to virus IEA
Inferred from Electronic Annotation
more info
  
involved_in negative regulation of DNA-templated transcription ISO
Inferred from Sequence Orthology
more info
  
involved_in negative regulation of translation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in negative regulation of viral genome replication IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in positive regulation of DNA-templated transcription ISO
Inferred from Sequence Orthology
more info
  
acts_upstream_of_or_within protein methylation ISO
Inferred from Sequence Orthology
more info
 PubMed 
involved_in protein phosphorylation IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in protein phosphorylation ISO
Inferred from Sequence Orthology
more info
  
Component Evidence Code Pubs
located_in cytoplasm IDA
Inferred from Direct Assay
more info
 PubMed 
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
  
located_in mitochondrion ISO
Inferred from Sequence Orthology
more info
  
located_in nucleolus ISO
Inferred from Sequence Orthology
more info
  
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
  
located_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus ISO
Inferred from Sequence Orthology
more info
 PubMed 
part_of ribonucleoprotein complex ISO
Inferred from Sequence Orthology
more info
  

General protein information

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Preferred Names
interleukin enhancer-binding factor 3
Names
M phase phosphoprotein 4
nuclear factor 90
nuclear factor associated with dsRNA

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001042707.2 → NP_001036172.1  interleukin enhancer-binding factor 3 isoform 2

    See identical proteins and their annotated locations for NP_001036172.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (2) lacks an alternate in-frame exon in the 5' coding region, compared to variant 1. The encoded isoform (2) is shorter and has a distinct N-terminus, compared to isoform 1. This variant encodes an NFAR-2 isoform that is also known as Ilf3 S.
    Source sequence(s)
    AF497752, AI415652, BB851524
    Consensus CDS
    CCDS40552.1
    UniProtKB/Swiss-Prot
    Q80VD5, Q812A1, Q8BP80, Q8C2H8, Q8K588, Q9Z1X4
    Related
    ENSMUSP00000065770.5, ENSMUST00000067646.12
    Conserved Domains (3) summary
    smart00572
    Location:88 → 342
    DZF; domain in DSRM or ZnF_C2H2 domain containing proteins
    cd19910
    Location:398 → 470
    DSRM_ILF3_rpt1; first double-stranded RNA binding motif of interleukin enhancer-binding factor 3 (ILF3) and similar proteins
    cd19912
    Location:520 → 591
    DSRM_ILF3_rpt2; second double-stranded RNA binding motif of interleukin enhancer-binding factor 3 (ILF3) and similar proteins

  2. NM_001042708.2 → NP_001036173.1  interleukin enhancer-binding factor 3 isoform 3

    See identical proteins and their annotated locations for NP_001036173.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (3) lacks several 3' exons and contains an alternate 3' coding region and 3' UTR, compared to variant 1. The encoded isoform (3) is shorter and has a distinct C-terminus, compared to isoform 1. This variant encodes an NFAR-1 isoform that is also known as NF90 L.
    Source sequence(s)
    BB851524, DQ104405
    Consensus CDS
    CCDS90512.1
    UniProtKB/TrEMBL
    Q45VK6
    Related
    ENSMUSP00000149786.2, ENSMUST00000216892.2
    Conserved Domains (2) summary
    smart00572
    Location:101 → 355
    DZF; domain in DSRM or ZnF_C2H2 domain containing proteins
    smart00358
    Location:415 → 479
    DSRM; Double-stranded RNA binding motif

  3. NM_001042709.2 → NP_001036174.1  interleukin enhancer-binding factor 3 isoform 4

    See identical proteins and their annotated locations for NP_001036174.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (4) lacks an alternate in-frame exon in the 5' coding region, lacks several 3' exons, and contains an alternate 3' coding region and 3' UTR, compared to variant 1. The encoded isoform (4) is shorter and has distinct N- and C-termini, compared to isoform 1. This variant encodes an NFAR-1 isoform that is also known as NF90 S.
    Source sequence(s)
    BB851524, DQ104406
    Consensus CDS
    CCDS40553.1
    UniProtKB/TrEMBL
    Q45VK5
    Related
    ENSMUSP00000111074.2, ENSMUST00000115414.3
    Conserved Domains (2) summary
    smart00572
    Location:88 → 342
    DZF; domain in DSRM or ZnF_C2H2 domain containing proteins
    smart00358
    Location:402 → 466
    DSRM; Double-stranded RNA binding motif

  4. NM_001277321.1 → NP_001264250.1  interleukin enhancer-binding factor 3 isoform 5

    Status: REVIEWED

    Description
    Transcript Variant: This variant (5) uses an alternate in-frame splice site in the 3' coding region, compared to variant 1. The encoded isoform (5) is shorter than isoform 1. This variant encodes an NFAR-2 isoform.
    Source sequence(s)
    AF497751, AI415652, BB851524
    Consensus CDS
    CCDS90513.1
    UniProtKB/TrEMBL
    A0A1L1STE4
    Related
    ENSMUSP00000150280.2, ENSMUST00000213518.2
    Conserved Domains (2) summary
    smart00572
    Location:101 → 355
    DZF; domain in DSRM or ZnF_C2H2 domain containing proteins
    smart00358
    Location:415 → 479
    DSRM; Double-stranded RNA binding motif

  5. NM_001277322.1 → NP_001264251.1  interleukin enhancer-binding factor 3 isoform 1

    See identical proteins and their annotated locations for NP_001264251.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (6) differs in the 5' UTR, compared to variant 1. Both variants 1 and 6 encode the same isoform (1). This variant encodes an NFAR-2 isoform that is also known as Ilf3 L.
    Source sequence(s)
    AC122525, AF497751, AI415652
    Consensus CDS
    CCDS90514.1
    UniProtKB/Swiss-Prot
    Q9Z1X4
    Related
    ENSMUSP00000149483.2, ENSMUST00000213603.2
    Conserved Domains (2) summary
    smart00572
    Location:101 → 355
    DZF; domain in DSRM or ZnF_C2H2 domain containing proteins
    smart00358
    Location:415 → 479
    DSRM; Double-stranded RNA binding motif

  6. NM_010561.3 → NP_034691.2  interleukin enhancer-binding factor 3 isoform 1

    See identical proteins and their annotated locations for NP_034691.2

    Status: REVIEWED

    Description
    Transcript Variant: This variant (1) encodes the longest isoform (1). Both variants 1 and 6 encode the same isoform (1). This variant encodes an NFAR-2 isoform that is also known as Ilf3 L.
    Source sequence(s)
    AF497751, AI415652, BB851524
    Consensus CDS
    CCDS90514.1
    UniProtKB/Swiss-Prot
    Q9Z1X4
    Related
    ENSMUSP00000151032.2, ENSMUST00000214758.2
    Conserved Domains (2) summary
    smart00572
    Location:101 → 355
    DZF; domain in DSRM or ZnF_C2H2 domain containing proteins
    smart00358
    Location:415 → 479
    DSRM; Double-stranded RNA binding motif

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000075.7 Reference GRCm39 C57BL/6J

    Range
    21278964..21316659
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017313138.3 → XP_017168627.1  interleukin enhancer-binding factor 3 isoform X9

    Conserved Domains (3) summary
    smart00572
    Location:88 → 342
    DZF; domain in DSRM or ZnF_C2H2 domain containing proteins
    cd19912
    Location:464 → 535
    DSRM_ILF3_rpt2; second double-stranded RNA binding motif of interleukin enhancer-binding factor 3 (ILF3) and similar proteins
    cl00054
    Location:398 → 460
    DSRM_SF; double-stranded RNA binding motif (DSRM) superfamily

  2. XM_036154622.1 → XP_036010515.1  interleukin enhancer-binding factor 3 isoform X5

    Conserved Domains (3) summary
    smart00572
    Location:88 → 342
    DZF; domain in DSRM or ZnF_C2H2 domain containing proteins
    cd19910
    Location:398 → 470
    DSRM_ILF3_rpt1; first double-stranded RNA binding motif of interleukin enhancer-binding factor 3 (ILF3) and similar proteins
    cd19912
    Location:520 → 591
    DSRM_ILF3_rpt2; second double-stranded RNA binding motif of interleukin enhancer-binding factor 3 (ILF3) and similar proteins

  3. XM_017313140.3 → XP_017168629.1  interleukin enhancer-binding factor 3 isoform X12

    Conserved Domains (3) summary
    smart00572
    Location:88 → 342
    DZF; domain in DSRM or ZnF_C2H2 domain containing proteins
    cd19910
    Location:398 → 470
    DSRM_ILF3_rpt1; first double-stranded RNA binding motif of interleukin enhancer-binding factor 3 (ILF3) and similar proteins
    cd19912
    Location:520 → 591
    DSRM_ILF3_rpt2; second double-stranded RNA binding motif of interleukin enhancer-binding factor 3 (ILF3) and similar proteins

  4. XM_030244068.2 → XP_030099928.1  interleukin enhancer-binding factor 3 isoform X8

    Conserved Domains (3) summary
    smart00572
    Location:101 → 355
    DZF; domain in DSRM or ZnF_C2H2 domain containing proteins
    cd19912
    Location:477 → 548
    DSRM_ILF3_rpt2; second double-stranded RNA binding motif of interleukin enhancer-binding factor 3 (ILF3) and similar proteins
    cl00054
    Location:411 → 473
    DSRM_SF; double-stranded RNA binding motif (DSRM) superfamily

  5. XM_036154621.1 → XP_036010514.1  interleukin enhancer-binding factor 3 isoform X4

    Conserved Domains (3) summary
    smart00572
    Location:101 → 355
    DZF; domain in DSRM or ZnF_C2H2 domain containing proteins
    cd19910
    Location:411 → 483
    DSRM_ILF3_rpt1; first double-stranded RNA binding motif of interleukin enhancer-binding factor 3 (ILF3) and similar proteins
    cd19912
    Location:533 → 604
    DSRM_ILF3_rpt2; second double-stranded RNA binding motif of interleukin enhancer-binding factor 3 (ILF3) and similar proteins

  6. XM_017313139.3 → XP_017168628.1  interleukin enhancer-binding factor 3 isoform X11

    Conserved Domains (3) summary
    smart00572
    Location:101 → 355
    DZF; domain in DSRM or ZnF_C2H2 domain containing proteins
    cd19910
    Location:411 → 483
    DSRM_ILF3_rpt1; first double-stranded RNA binding motif of interleukin enhancer-binding factor 3 (ILF3) and similar proteins
    cd19912
    Location:533 → 604
    DSRM_ILF3_rpt2; second double-stranded RNA binding motif of interleukin enhancer-binding factor 3 (ILF3) and similar proteins

  7. XM_017313146.3 → XP_017168635.1  interleukin enhancer-binding factor 3 isoform X17

    Conserved Domains (2) summary
    cd19912
    Location:185 → 256
    DSRM_ILF3_rpt2; second double-stranded RNA binding motif of interleukin enhancer-binding factor 3 (ILF3) and similar proteins
    cl00054
    Location:63 → 135
    DSRM_SF; double-stranded RNA binding motif (DSRM) superfamily

  8. XM_036154628.1 → XP_036010521.1  interleukin enhancer-binding factor 3 isoform X19

    Conserved Domains (2) summary
    cd19912
    Location:129 → 200
    DSRM_ILF3_rpt2; second double-stranded RNA binding motif of interleukin enhancer-binding factor 3 (ILF3) and similar proteins
    cl00054
    Location:63 → 125
    DSRM_SF; double-stranded RNA binding motif (DSRM) superfamily

  9. XM_030244069.2 → XP_030099929.1  interleukin enhancer-binding factor 3 isoform X16

    Conserved Domains (3) summary
    cl02675
    Location:1 → 77
    DZF; DZF domain
    cd19912
    Location:255 → 326
    DSRM_ILF3_rpt2; second double-stranded RNA binding motif of interleukin enhancer-binding factor 3 (ILF3) and similar proteins
    cl00054
    Location:133 → 205
    DSRM_SF; double-stranded RNA binding motif (DSRM) superfamily

  10. XM_036154626.1 → XP_036010519.1  interleukin enhancer-binding factor 3 isoform X17

    Conserved Domains (2) summary
    cd19912
    Location:185 → 256
    DSRM_ILF3_rpt2; second double-stranded RNA binding motif of interleukin enhancer-binding factor 3 (ILF3) and similar proteins
    cl00054
    Location:63 → 135
    DSRM_SF; double-stranded RNA binding motif (DSRM) superfamily

  11. XM_036154624.1 → XP_036010517.1  interleukin enhancer-binding factor 3 isoform X15

    Conserved Domains (3) summary
    cl02675
    Location:1 → 163
    DZF; DZF domain
    cd19912
    Location:285 → 356
    DSRM_ILF3_rpt2; second double-stranded RNA binding motif of interleukin enhancer-binding factor 3 (ILF3) and similar proteins
    cl00054
    Location:219 → 281
    DSRM_SF; double-stranded RNA binding motif (DSRM) superfamily

  12. XM_017313148.3 → XP_017168637.1  interleukin enhancer-binding factor 3 isoform X17

    Conserved Domains (2) summary
    cd19912
    Location:185 → 256
    DSRM_ILF3_rpt2; second double-stranded RNA binding motif of interleukin enhancer-binding factor 3 (ILF3) and similar proteins
    cl00054
    Location:63 → 135
    DSRM_SF; double-stranded RNA binding motif (DSRM) superfamily

  13. XM_036154625.1 → XP_036010518.1  interleukin enhancer-binding factor 3 isoform X16

    Conserved Domains (3) summary
    cl02675
    Location:1 → 77
    DZF; DZF domain
    cd19912
    Location:255 → 326
    DSRM_ILF3_rpt2; second double-stranded RNA binding motif of interleukin enhancer-binding factor 3 (ILF3) and similar proteins
    cl00054
    Location:133 → 205
    DSRM_SF; double-stranded RNA binding motif (DSRM) superfamily

  14. XM_017313147.3 → XP_017168636.1  interleukin enhancer-binding factor 3 isoform X17

    Conserved Domains (2) summary
    cd19912
    Location:185 → 256
    DSRM_ILF3_rpt2; second double-stranded RNA binding motif of interleukin enhancer-binding factor 3 (ILF3) and similar proteins
    cl00054
    Location:63 → 135
    DSRM_SF; double-stranded RNA binding motif (DSRM) superfamily

  15. XM_017313143.3 → XP_017168632.1  interleukin enhancer-binding factor 3 isoform X14

    Conserved Domains (3) summary
    cl02675
    Location:1 → 163
    DZF; DZF domain
    cd19910
    Location:219 → 291
    DSRM_ILF3_rpt1; first double-stranded RNA binding motif of interleukin enhancer-binding factor 3 (ILF3) and similar proteins
    cd19912
    Location:341 → 412
    DSRM_ILF3_rpt2; second double-stranded RNA binding motif of interleukin enhancer-binding factor 3 (ILF3) and similar proteins

  16. XM_017313145.3 → XP_017168634.1  interleukin enhancer-binding factor 3 isoform X16

    Conserved Domains (3) summary
    cl02675
    Location:1 → 77
    DZF; DZF domain
    cd19912
    Location:255 → 326
    DSRM_ILF3_rpt2; second double-stranded RNA binding motif of interleukin enhancer-binding factor 3 (ILF3) and similar proteins
    cl00054
    Location:133 → 205
    DSRM_SF; double-stranded RNA binding motif (DSRM) superfamily

  17. XM_017313150.3 → XP_017168639.1  interleukin enhancer-binding factor 3 isoform X17

    Conserved Domains (2) summary
    cd19912
    Location:185 → 256
    DSRM_ILF3_rpt2; second double-stranded RNA binding motif of interleukin enhancer-binding factor 3 (ILF3) and similar proteins
    cl00054
    Location:63 → 135
    DSRM_SF; double-stranded RNA binding motif (DSRM) superfamily

  18. XM_006510034.5 → XP_006510097.1  interleukin enhancer-binding factor 3 isoform X14

    Conserved Domains (3) summary
    cl02675
    Location:1 → 163
    DZF; DZF domain
    cd19910
    Location:219 → 291
    DSRM_ILF3_rpt1; first double-stranded RNA binding motif of interleukin enhancer-binding factor 3 (ILF3) and similar proteins
    cd19912
    Location:341 → 412
    DSRM_ILF3_rpt2; second double-stranded RNA binding motif of interleukin enhancer-binding factor 3 (ILF3) and similar proteins

  19. XM_017313149.3 → XP_017168638.1  interleukin enhancer-binding factor 3 isoform X17

    Conserved Domains (2) summary
    cd19912
    Location:185 → 256
    DSRM_ILF3_rpt2; second double-stranded RNA binding motif of interleukin enhancer-binding factor 3 (ILF3) and similar proteins
    cl00054
    Location:63 → 135
    DSRM_SF; double-stranded RNA binding motif (DSRM) superfamily

  20. XM_006510036.5 → XP_006510099.1  interleukin enhancer-binding factor 3 isoform X16

    See identical proteins and their annotated locations for XP_006510099.1

    Conserved Domains (3) summary
    cl02675
    Location:1 → 77
    DZF; DZF domain
    cd19912
    Location:255 → 326
    DSRM_ILF3_rpt2; second double-stranded RNA binding motif of interleukin enhancer-binding factor 3 (ILF3) and similar proteins
    cl00054
    Location:133 → 205
    DSRM_SF; double-stranded RNA binding motif (DSRM) superfamily

  21. XM_017313152.3 → XP_017168641.1  interleukin enhancer-binding factor 3 isoform X17

    Conserved Domains (2) summary
    cd19912
    Location:185 → 256
    DSRM_ILF3_rpt2; second double-stranded RNA binding motif of interleukin enhancer-binding factor 3 (ILF3) and similar proteins
    cl00054
    Location:63 → 135
    DSRM_SF; double-stranded RNA binding motif (DSRM) superfamily

  22. XM_006510037.5 → XP_006510100.1  interleukin enhancer-binding factor 3 isoform X17

    Conserved Domains (2) summary
    cd19912
    Location:185 → 256
    DSRM_ILF3_rpt2; second double-stranded RNA binding motif of interleukin enhancer-binding factor 3 (ILF3) and similar proteins
    cl00054
    Location:63 → 135
    DSRM_SF; double-stranded RNA binding motif (DSRM) superfamily

  23. XM_006510029.5 → XP_006510092.1  interleukin enhancer-binding factor 3 isoform X2

    See identical proteins and their annotated locations for XP_006510092.1

    Conserved Domains (3) summary
    smart00572
    Location:93 → 347
    DZF; domain in DSRM or ZnF_C2H2 domain containing proteins
    cd19910
    Location:403 → 475
    DSRM_ILF3_rpt1; first double-stranded RNA binding motif of interleukin enhancer-binding factor 3 (ILF3) and similar proteins
    cd19912
    Location:525 → 596
    DSRM_ILF3_rpt2; second double-stranded RNA binding motif of interleukin enhancer-binding factor 3 (ILF3) and similar proteins

  24. XM_036154627.1 → XP_036010520.1  interleukin enhancer-binding factor 3 isoform X18

    Conserved Domains (2) summary
    cd19912
    Location:185 → 256
    DSRM_ILF3_rpt2; second double-stranded RNA binding motif of interleukin enhancer-binding factor 3 (ILF3) and similar proteins
    cl00054
    Location:63 → 135
    DSRM_SF; double-stranded RNA binding motif (DSRM) superfamily

  25. XM_011242403.4 → XP_011240705.1  interleukin enhancer-binding factor 3 isoform X1

    Conserved Domains (3) summary
    smart00572
    Location:106 → 360
    DZF; domain in DSRM or ZnF_C2H2 domain containing proteins
    cd19910
    Location:416 → 488
    DSRM_ILF3_rpt1; first double-stranded RNA binding motif of interleukin enhancer-binding factor 3 (ILF3) and similar proteins
    cd19912
    Location:538 → 609
    DSRM_ILF3_rpt2; second double-stranded RNA binding motif of interleukin enhancer-binding factor 3 (ILF3) and similar proteins

  26. XM_011242404.4 → XP_011240706.1  interleukin enhancer-binding factor 3 isoform X6

    Conserved Domains (3) summary
    smart00572
    Location:106 → 360
    DZF; domain in DSRM or ZnF_C2H2 domain containing proteins
    cd19912
    Location:482 → 553
    DSRM_ILF3_rpt2; second double-stranded RNA binding motif of interleukin enhancer-binding factor 3 (ILF3) and similar proteins
    cl00054
    Location:416 → 478
    DSRM_SF; double-stranded RNA binding motif (DSRM) superfamily

  27. XM_036154620.1 → XP_036010513.1  interleukin enhancer-binding factor 3 isoform X3

    Conserved Domains (3) summary
    smart00572
    Location:106 → 360
    DZF; domain in DSRM or ZnF_C2H2 domain containing proteins
    cd19910
    Location:416 → 488
    DSRM_ILF3_rpt1; first double-stranded RNA binding motif of interleukin enhancer-binding factor 3 (ILF3) and similar proteins
    cd19912
    Location:538 → 609
    DSRM_ILF3_rpt2; second double-stranded RNA binding motif of interleukin enhancer-binding factor 3 (ILF3) and similar proteins

  28. XM_011242405.4 → XP_011240707.1  interleukin enhancer-binding factor 3 isoform X10

    Conserved Domains (3) summary
    smart00572
    Location:106 → 360
    DZF; domain in DSRM or ZnF_C2H2 domain containing proteins
    cd19910
    Location:416 → 488
    DSRM_ILF3_rpt1; first double-stranded RNA binding motif of interleukin enhancer-binding factor 3 (ILF3) and similar proteins
    cd19912
    Location:538 → 609
    DSRM_ILF3_rpt2; second double-stranded RNA binding motif of interleukin enhancer-binding factor 3 (ILF3) and similar proteins

  29. XM_017313142.3 → XP_017168631.1  interleukin enhancer-binding factor 3 isoform X14

    Conserved Domains (3) summary
    cl02675
    Location:1 → 163
    DZF; DZF domain
    cd19910
    Location:219 → 291
    DSRM_ILF3_rpt1; first double-stranded RNA binding motif of interleukin enhancer-binding factor 3 (ILF3) and similar proteins
    cd19912
    Location:341 → 412
    DSRM_ILF3_rpt2; second double-stranded RNA binding motif of interleukin enhancer-binding factor 3 (ILF3) and similar proteins

  30. XM_036154623.1 → XP_036010516.1  interleukin enhancer-binding factor 3 isoform X7

    Conserved Domains (3) summary
    smart00572
    Location:93 → 347
    DZF; domain in DSRM or ZnF_C2H2 domain containing proteins
    cd19910
    Location:403 → 475
    DSRM_ILF3_rpt1; first double-stranded RNA binding motif of interleukin enhancer-binding factor 3 (ILF3) and similar proteins
    cd19912
    Location:525 → 596
    DSRM_ILF3_rpt2; second double-stranded RNA binding motif of interleukin enhancer-binding factor 3 (ILF3) and similar proteins

  31. XM_017313141.3 → XP_017168630.1  interleukin enhancer-binding factor 3 isoform X13

    Conserved Domains (3) summary
    smart00572
    Location:93 → 347
    DZF; domain in DSRM or ZnF_C2H2 domain containing proteins
    cd19910
    Location:403 → 475
    DSRM_ILF3_rpt1; first double-stranded RNA binding motif of interleukin enhancer-binding factor 3 (ILF3) and similar proteins
    cd19912
    Location:525 → 596
    DSRM_ILF3_rpt2; second double-stranded RNA binding motif of interleukin enhancer-binding factor 3 (ILF3) and similar proteins

RNA

  1. XR_004935330.1 RNA Sequence

  2. XR_004935326.1 RNA Sequence

  3. XR_003947788.1 RNA Sequence

  4. XR_004935329.1 RNA Sequence

  5. XR_001778803.3 RNA Sequence

  6. XR_004935327.1 RNA Sequence

  7. XR_001778804.3 RNA Sequence

  8. XR_001778802.3 RNA Sequence

  9. XR_004935324.1 RNA Sequence

  10. XR_004935325.1 RNA Sequence

  11. XR_003947790.2 RNA Sequence

  12. XR_003947787.1 RNA Sequence

  13. XR_004935328.1 RNA Sequence

  14. XR_003947786.2 RNA Sequence

  15. XR_004935323.1 RNA Sequence

  16. XR_004935322.1 RNA Sequence

  17. XR_001778801.3 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9Z1X4.2 GenPept UniProtKB/Swiss-Prot:Q9Z1X4

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