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Il2rb interleukin 2 receptor, beta chain [ Mus musculus (house mouse) ]

Gene ID: 16185, updated on 18-Apr-2024

Summary

Official Symbol
Il2rbprovided by MGI
Official Full Name
interleukin 2 receptor, beta chainprovided by MGI
Primary source
MGI:MGI:96550
See related
Ensembl:ENSMUSG00000068227 AllianceGenome:MGI:96550
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
p70; CD122; IL15Rbeta; Il-2Rbeta; IL-15Rbeta; Il-2/15Rbeta
Summary
The interleukin 2 receptor is composed of alpha and beta subunits. The beta subunit encoded by this gene is very homologous to the human beta subunit and also shows structural similarity to other cytokine receptors. [provided by RefSeq, Jul 2008]
Expression
Biased expression in spleen adult (RPKM 30.6), mammary gland adult (RPKM 14.0) and 8 other tissues See more
Orthologs
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Genomic context

Location:
15 E1; 15 37.52 cM
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (78363456..78396569, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (78479256..78511621, complement)

Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene potassium channel tetramerisation domain containing 17 Neighboring gene STARR-positive B cell enhancer ABC_E8598 Neighboring gene transmembrane serine protease 6 Neighboring gene STARR-seq mESC enhancer starr_39146 Neighboring gene CapStarr-seq enhancer MGSCv37_chr15:78306098-78306207 Neighboring gene C1q and tumor necrosis factor related protein 6 Neighboring gene STARR-positive B cell enhancer ABC_E4139 Neighboring gene STARR-seq mESC enhancer starr_39149 Neighboring gene somatostatin receptor 3

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (4)  1 citation
  • Chemically induced (ENU) (3) 
  • Endonuclease-mediated (3) 

Pathways from PubChem

General gene information

Markers

Clone Names

  • MGC118674

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables coreceptor activity ISO
Inferred from Sequence Orthology
more info
 
enables cytokine receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables interleukin-15 receptor activity ISO
Inferred from Sequence Orthology
more info
 
enables interleukin-2 binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables interleukin-2 binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables interleukin-2 binding ISO
Inferred from Sequence Orthology
more info
 
enables interleukin-2 receptor activity ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in cell surface IDA
Inferred from Direct Assay
more info
PubMed 
located_in cell surface ISO
Inferred from Sequence Orthology
more info
 
is_active_in external side of plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in external side of plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 
located_in plasma membrane TAS
Traceable Author Statement
more info
 

General protein information

Preferred Names
interleukin-2 receptor subunit beta
Names
IL-15 receptor beta chain
IL-2 receptor beta chain
IL-2 receptor subunit beta
IL-2/15 receptor-beta
IL-2R subunit beta
IL-2RB
high affinity IL-2 receptor subunit beta
p70-75

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_008368.4NP_032394.1  interleukin-2 receptor subunit beta precursor

    See identical proteins and their annotated locations for NP_032394.1

    Status: REVIEWED

    Source sequence(s)
    AK017288, BQ033566
    Consensus CDS
    CCDS27616.1
    UniProtKB/Swiss-Prot
    P16297, Q3TZT2
    UniProtKB/TrEMBL
    Q3TEQ2, Q8CBU1
    Related
    ENSMUSP00000086820.2, ENSMUST00000089398.9
    Conserved Domains (2) summary
    cd00063
    Location:135232
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam18707
    Location:32124
    IL2RB_N1; Interleukin-2 receptor subunit beta N-terminal domain 1

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000081.7 Reference GRCm39 C57BL/6J

    Range
    78363456..78396569 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006520478.4XP_006520541.1  interleukin-2 receptor subunit beta isoform X1

    See identical proteins and their annotated locations for XP_006520541.1

    UniProtKB/Swiss-Prot
    P16297, Q3TZT2
    UniProtKB/TrEMBL
    Q3TEQ2, Q8CBU1
    Conserved Domains (2) summary
    cd00063
    Location:135232
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam18707
    Location:32124
    IL2RB_N1; Interleukin-2 receptor subunit beta N-terminal domain 1
  2. XM_006520477.4XP_006520540.1  interleukin-2 receptor subunit beta isoform X1

    See identical proteins and their annotated locations for XP_006520540.1

    UniProtKB/Swiss-Prot
    P16297, Q3TZT2
    UniProtKB/TrEMBL
    Q3TEQ2, Q8CBU1
    Conserved Domains (2) summary
    cd00063
    Location:135232
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam18707
    Location:32124
    IL2RB_N1; Interleukin-2 receptor subunit beta N-terminal domain 1
  3. XM_006520479.2XP_006520542.1  interleukin-2 receptor subunit beta isoform X1

    See identical proteins and their annotated locations for XP_006520542.1

    UniProtKB/Swiss-Prot
    P16297, Q3TZT2
    UniProtKB/TrEMBL
    Q3TEQ2, Q8CBU1
    Conserved Domains (2) summary
    cd00063
    Location:135232
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam18707
    Location:32124
    IL2RB_N1; Interleukin-2 receptor subunit beta N-terminal domain 1
  4. XM_006520480.3XP_006520543.1  interleukin-2 receptor subunit beta isoform X1

    See identical proteins and their annotated locations for XP_006520543.1

    UniProtKB/Swiss-Prot
    P16297, Q3TZT2
    UniProtKB/TrEMBL
    Q3TEQ2, Q8CBU1
    Related
    ENSMUSP00000127006.2, ENSMUST00000163494.3
    Conserved Domains (2) summary
    cd00063
    Location:135232
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam18707
    Location:32124
    IL2RB_N1; Interleukin-2 receptor subunit beta N-terminal domain 1
  5. XM_006520481.4XP_006520544.1  interleukin-2 receptor subunit beta isoform X1

    See identical proteins and their annotated locations for XP_006520544.1

    UniProtKB/Swiss-Prot
    P16297, Q3TZT2
    UniProtKB/TrEMBL
    Q3TEQ2, Q8CBU1
    Conserved Domains (2) summary
    cd00063
    Location:135232
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam18707
    Location:32124
    IL2RB_N1; Interleukin-2 receptor subunit beta N-terminal domain 1