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Gpr3 G-protein coupled receptor 3 [ Mus musculus (house mouse) ]

Gene ID: 14748, updated on 30-Apr-2024

Summary

Official Symbol
Gpr3provided by MGI
Official Full Name
G-protein coupled receptor 3provided by MGI
Primary source
MGI:MGI:101908
See related
Ensembl:ENSMUSG00000049649 AllianceGenome:MGI:101908
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gpcr3; Gpcr20; Gpcr21
Summary
Predicted to enable G protein-coupled receptor activity. Involved in positive regulation of cold-induced thermogenesis. Acts upstream of or within regulation of meiotic nuclear division. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in cytoplasm and plasma membrane. Is expressed in central nervous system; eye; gonad; and salivary gland. Orthologous to human GPR3 (G protein-coupled receptor 3). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in cortex adult (RPKM 2.5), testis adult (RPKM 2.4) and 10 other tissues See more
Orthologs
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Genomic context

Location:
4 D2.3; 4 66.24 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (132936651..132939847, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (133209340..133212536, complement)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_11614 Neighboring gene nuclear encoded tRNA glycine 1 (anticodon GCC) Neighboring gene STARR-positive B cell enhancer ABC_E123 Neighboring gene CapStarr-seq enhancer MGSCv37_chr4:132688057-132688210 Neighboring gene STARR-seq mESC enhancer starr_11615 Neighboring gene WASP family, member 2 Neighboring gene CapStarr-seq enhancer MGSCv37_chr4:132725518-132725684 Neighboring gene CapStarr-seq enhancer MGSCv37_chr4:132730221-132730450 Neighboring gene STARR-seq mESC enhancer starr_11616 Neighboring gene microRNA 7017 Neighboring gene CD164 sialomucin-like 2 Neighboring gene ficolin C pseudogene Neighboring gene mitogen-activated protein kinase kinase kinase 6

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 
  • Targeted (2)  1 citation

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables G protein-coupled receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
G-protein coupled receptor 3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_008154.3NP_032180.1  G-protein coupled receptor 3

    See identical proteins and their annotated locations for NP_032180.1

    Status: VALIDATED

    Source sequence(s)
    AI854631, AK140302, BB851645
    Consensus CDS
    CCDS18743.1
    UniProtKB/Swiss-Prot
    P35413, Q3USD4
    Related
    ENSMUSP00000062083.9, ENSMUST00000052090.9
    Conserved Domains (2) summary
    pfam00001
    Location:57297
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:58162
    7tm_4; Olfactory receptor

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    132936651..132939847 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)