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Galr2 galanin receptor 2 [ Mus musculus (house mouse) ]

Gene ID: 14428, updated on 11-Apr-2024

Summary

Official Symbol
Galr2provided by MGI
Official Full Name
galanin receptor 2provided by MGI
Primary source
MGI:MGI:1337018
See related
Ensembl:ENSMUSG00000020793 AllianceGenome:MGI:1337018
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
mGalR
Summary
Predicted to enable galanin receptor activity and peptide hormone binding activity. Acts upstream of or within neuron projection development. Predicted to be located in cilium. Predicted to be integral component of plasma membrane. Orthologous to human GALR2 (galanin receptor 2). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Broad expression in large intestine adult (RPKM 4.8), colon adult (RPKM 3.3) and 18 other tissues See more
Orthologs
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Genomic context

Location:
11 E2; 11 81.1 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (116170520..116174776)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (116280106..116283950)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene envoplakin Neighboring gene predicted gene, 33250 Neighboring gene signal recognition particle 68 Neighboring gene STARR-positive B cell enhancer ABC_E9847 Neighboring gene exocyst complex component 7 Neighboring gene STARR-positive B cell enhancer ABC_E7099 Neighboring gene predicted gene, 26730

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from PubChem

General gene information

Markers

Clone Names

  • MGC151357, MGC151359

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 
enables galanin receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables galanin receptor activity ISO
Inferred from Sequence Orthology
more info
 
enables neuropeptide binding ISO
Inferred from Sequence Orthology
more info
 
enables peptide hormone binding ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in adenylate cyclase-activating G protein-coupled receptor signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in adenylate cyclase-modulating G protein-coupled receptor signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in galanin-activated signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in inositol phosphate metabolic process ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of adenylate cyclase activity IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within neuron projection development IDA
Inferred from Direct Assay
more info
PubMed 
involved_in neuropeptide signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in phosphatidylinositol metabolic process ISO
Inferred from Sequence Orthology
more info
 
involved_in phospholipase C-activating G protein-coupled receptor signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of cytosolic calcium ion concentration ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of large conductance calcium-activated potassium channel activity ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of transcription by RNA polymerase II ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within signal transduction IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in cilium ISO
Inferred from Sequence Orthology
more info
PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
galanin receptor type 2
Names
GAL2-R
GALR-2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_010254.4NP_034384.3  galanin receptor type 2

    See identical proteins and their annotated locations for NP_034384.3

    Status: VALIDATED

    Source sequence(s)
    AK053776, AW046646, BC116982
    Consensus CDS
    CCDS25663.1
    UniProtKB/Swiss-Prot
    O88854, Q14A53, Q9Z2B0
    UniProtKB/TrEMBL
    Q8BKB0
    Related
    ENSMUSP00000054062.3, ENSMUST00000055872.3
    Conserved Domains (2) summary
    pfam00001
    Location:41291
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:31305
    7tm_4; Olfactory receptor

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    116170520..116174776
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011248727.4XP_011247029.1  galanin receptor type 2 isoform X1

    UniProtKB/TrEMBL
    Q8BKB0
    Conserved Domains (1) summary
    cd15097
    Location:25302
    7tmA_Gal2_Gal3_R; galanin receptor subtypes 2 and 3, member of the class A family of seven-transmembrane G protein-coupled receptors