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Galr1 galanin receptor 1 [ Mus musculus (house mouse) ]

Gene ID: 14427, updated on 21-Apr-2024

Summary

Official Symbol
Galr1provided by MGI
Official Full Name
galanin receptor 1provided by MGI
Primary source
MGI:MGI:1096364
See related
Ensembl:ENSMUSG00000024553 AllianceGenome:MGI:1096364
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Galnr1
Summary
Predicted to enable galanin receptor activity; neuropeptide binding activity; and peptide hormone binding activity. Predicted to be involved in G protein-coupled receptor signaling pathway; positive regulation of cortisol secretion; and positive regulation of transcription by RNA polymerase II. Predicted to act upstream of or within signal transduction. Predicted to be located in nucleoplasm and plasma membrane. Predicted to be integral component of plasma membrane. Is expressed in adrenal gland; alimentary system; male reproductive gland or organ; and nervous system. Orthologous to human GALR1 (galanin receptor 1). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Low expression observed in reference dataset See more
Orthologs
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Genomic context

Location:
18 E3; 18 55.78 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 18 NC_000084.7 (82410621..82424902, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 18 NC_000084.6 (82392496..82406777, complement)

Chromosome 18 - NC_000084.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_45198 Neighboring gene microRNA 5127 Neighboring gene STARR-seq mESC enhancer starr_45199 Neighboring gene STARR-seq mESC enhancer starr_45200 Neighboring gene STARR-seq mESC enhancer starr_45201 Neighboring gene STARR-seq mESC enhancer starr_45203 Neighboring gene tubulin, alpha 1B pseudogene Neighboring gene STARR-positive B cell enhancer ABC_E7618 Neighboring gene CapStarr-seq enhancer MGSCv37_chr18:82641329-82641438 Neighboring gene STARR-seq mESC enhancer starr_45206 Neighboring gene CapStarr-seq enhancer MGSCv37_chr18:82698694-82698847 Neighboring gene STARR-positive B cell enhancer ABC_E7619 Neighboring gene myelin basic protein Neighboring gene STARR-seq mESC enhancer starr_45208 Neighboring gene ribosomal protein L21, pseudogene 8 Neighboring gene predicted gene, 57823

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (3)  1 citation
  • Endonuclease-mediated (2) 

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables G protein-coupled peptide receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 
enables galanin receptor activity ISO
Inferred from Sequence Orthology
more info
 
enables galanin receptor activity TAS
Traceable Author Statement
more info
PubMed 
enables neuropeptide binding ISO
Inferred from Sequence Orthology
more info
 
enables peptide hormone binding ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
galanin receptor type 1
Names
GAL1-R
GALR-1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_008082.2NP_032108.1  galanin receptor type 1

    See identical proteins and their annotated locations for NP_032108.1

    Status: VALIDATED

    Source sequence(s)
    AK138487, BQ176727, BU609759, Y15004
    Consensus CDS
    CCDS29372.1
    UniProtKB/Swiss-Prot
    P56479
    Related
    ENSMUSP00000066381.7, ENSMUST00000065224.8
    Conserved Domains (1) summary
    pfam00001
    Location:50302
    7tm_1; 7 transmembrane receptor (rhodopsin family)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000084.7 Reference GRCm39 C57BL/6J

    Range
    82410621..82424902 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)