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mt-nd6 NADH dehydrogenase 6, mitochondrial [ Danio rerio (zebrafish) ]

Gene ID: 140536, updated on 27-Mar-2024

Summary

Official Symbol
mt-nd6provided by ZNC
Official Full Name
NADH dehydrogenase 6, mitochondrialprovided by ZNC
Primary source
ZFIN:ZDB-GENE-011205-13
See related
AllianceGenome:ZFIN:ZDB-GENE-011205-13
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
Also known as
mtnd6; ND6
Summary
Predicted to enable NADH dehydrogenase (ubiquinone) activity. Predicted to be involved in mitochondrial electron transport, NADH to ubiquinone and mitochondrial respiratory chain complex I assembly. Predicted to be located in mitochondrial inner membrane. Predicted to be active in mitochondrion. Human ortholog(s) of this gene implicated in Leber hereditary optic neuropathy; Leigh disease; and spinal muscular atrophy with lower extremity predominante 2B. Orthologous to human MT-ND6 (mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 6). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) MT (non-nuclear) NC_002333.2 (14714..15232, complement)
105 previous assembly GRCz10 (GCF_000002035.5) MT (non-nuclear) NC_002333.2 (14714..15232, complement)

Chromosome MT - NC_002333.2Genomic Context describing neighboring genes Neighboring gene tRNA-His Neighboring gene tRNA-Ser Neighboring gene tRNA-Leu Neighboring gene NADH dehydrogenase subunit 5 Neighboring gene tRNA-Glu Neighboring gene cytochrome b

Genomic regions, transcripts, and products

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables NADH dehydrogenase (ubiquinone) activity IEA
Inferred from Electronic Annotation
more info
 
enables NADH dehydrogenase (ubiquinone) activity ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
involved_in mitochondrial electron transport, NADH to ubiquinone ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in mitochondrial respiratory chain complex I assembly ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
 
located_in mitochondrial inner membrane ISS
Inferred from Sequence or Structural Similarity
more info
 
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 
located_in respirasome IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002333.2 Reference assembly

    Range
    14714..15232 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_059342.1 NADH dehydrogenase subunit 6 (mitochondrion) [Danio rerio]

    See identical proteins and their annotated locations for NP_059342.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9MIX9
    UniProtKB/TrEMBL
    A0A0A0VG13
    Related
    ENSDARP00000087880.3
    Conserved Domains (1) summary
    MTH00138
    Location:1172
    ND6; NADH dehydrogenase subunit 6; Provisional