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Creb1 cAMP responsive element binding protein 1 [ Mus musculus (house mouse) ]

Gene ID: 12912, updated on 21-Apr-2024

Summary

Official Symbol
Creb1provided by MGI
Official Full Name
cAMP responsive element binding protein 1provided by MGI
Primary source
MGI:MGI:88494
See related
Ensembl:ENSMUSG00000025958 AllianceGenome:MGI:88494
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Creb; Creb-1; 2310001E10Rik; 3526402H21Rik
Summary
Enables DNA-binding transcription activator activity, RNA polymerase II-specific and cAMP response element binding activity. Involved in several processes, including cellular response to retinoic acid; positive regulation of biosynthetic process; and protein stabilization. Acts upstream of or within several processes, including animal organ development; cellular response to hepatocyte growth factor stimulus; and cellular response to leukemia inhibitory factor. Located in chromatin and nucleus. Part of ATF4-CREB1 transcription factor complex. Is expressed in several structures, including genitourinary system; limb; maxillary process; peripheral nervous system ganglion; and telencephalon. Orthologous to human CREB1 (cAMP responsive element binding protein 1). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in CNS E11.5 (RPKM 5.1), thymus adult (RPKM 4.9) and 28 other tissues See more
Orthologs
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Genomic context

Location:
1 C2; 1 32.74 cM
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (64571963..64643707)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (64532794..64604548)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene predicted gene 28980 Neighboring gene predicted gene, 36148 Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:64578558-64578769 Neighboring gene STARR-positive B cell enhancer ABC_E4317 Neighboring gene STARR-positive B cell enhancer ABC_E2546 Neighboring gene STARR-positive B cell enhancer mm9_chr1:64631759-64632060 Neighboring gene STARR-positive B cell enhancer ABC_E10013 Neighboring gene methyltransferase 21A, HSPA lysine Neighboring gene predicted gene 29152

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables DNA binding IDA
Inferred from Direct Assay
more info
PubMed 
enables DNA-binding transcription activator activity, RNA polymerase II-specific IMP
Inferred from Mutant Phenotype
more info
PubMed 
enables DNA-binding transcription activator activity, RNA polymerase II-specific ISO
Inferred from Sequence Orthology
more info
 
enables DNA-binding transcription factor activity IDA
Inferred from Direct Assay
more info
PubMed 
enables DNA-binding transcription factor activity ISO
Inferred from Sequence Orthology
more info
PubMed 
enables DNA-binding transcription factor activity, RNA polymerase II-specific IBA
Inferred from Biological aspect of Ancestor
more info
 
enables DNA-binding transcription factor activity, RNA polymerase II-specific ISO
Inferred from Sequence Orthology
more info
 
enables Hsp70 protein binding ISO
Inferred from Sequence Orthology
more info
 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding ISO
Inferred from Sequence Orthology
more info
 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IDA
Inferred from Direct Assay
more info
PubMed 
enables RNA polymerase II-specific DNA-binding transcription factor binding ISO
Inferred from Sequence Orthology
more info
 
enables arrestin family protein binding ISO
Inferred from Sequence Orthology
more info
 
enables cAMP response element binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables cAMP response element binding IDA
Inferred from Direct Assay
more info
PubMed 
enables cAMP response element binding ISO
Inferred from Sequence Orthology
more info
 
enables double-stranded DNA binding ISO
Inferred from Sequence Orthology
more info
 
enables enzyme binding ISO
Inferred from Sequence Orthology
more info
 
enables histone acetyltransferase binding ISO
Inferred from Sequence Orthology
more info
 
enables identical protein binding ISO
Inferred from Sequence Orthology
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables sequence-specific DNA binding IDA
Inferred from Direct Assay
more info
PubMed 
enables sequence-specific DNA binding ISO
Inferred from Sequence Orthology
more info
 
enables sequence-specific double-stranded DNA binding ISO
Inferred from Sequence Orthology
more info
 
enables transcription cis-regulatory region binding ISO
Inferred from Sequence Orthology
more info
 
enables transcription coactivator binding ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within axonogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in cAMP-mediated signaling ISO
Inferred from Sequence Orthology
more info
PubMed 
acts_upstream_of_or_within cell differentiation IEA
Inferred from Electronic Annotation
more info
 
involved_in cellular response to forskolin ISO
Inferred from Sequence Orthology
more info
PubMed 
involved_in cellular response to growth factor stimulus IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of_or_within cellular response to hepatocyte growth factor stimulus IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of_or_within cellular response to leukemia inhibitory factor IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in cellular response to retinoic acid IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within cellular response to zinc ion IDA
Inferred from Direct Assay
more info
PubMed 
involved_in chemotaxis to arachidonic acid ISO
Inferred from Sequence Orthology
more info
 
involved_in circadian rhythm IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of hormone secretion IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in inhibition of non-skeletal tissue mineralization ISO
Inferred from Sequence Orthology
more info
PubMed 
acts_upstream_of_or_within lactation IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within lung epithelium development IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within lung saccule development IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in mRNA transcription by RNA polymerase II ISO
Inferred from Sequence Orthology
more info
PubMed 
acts_upstream_of_or_within mammary gland development IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within memory IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in memory ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of apoptotic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in negative regulation of apoptotic process ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of gene expression ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of transcription by competitive promoter binding ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of osteoclast differentiation IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of_or_within pituitary gland development IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of DNA-templated transcription IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in positive regulation of RNA polymerase II transcription preinitiation complex assembly ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of apoptotic process ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within positive regulation of cardiac muscle tissue development IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of fat cell differentiation IGI
Inferred from Genetic Interaction
more info
PubMed 
acts_upstream_of_or_within positive regulation of hormone secretion IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of lipid biosynthetic process IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in positive regulation of long-term synaptic potentiation ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within positive regulation of multicellular organism growth IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within positive regulation of osteoclast differentiation IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of_or_within positive regulation of transcription by RNA polymerase II IDA
Inferred from Direct Assay
more info
PubMed 
involved_in positive regulation of transcription by RNA polymerase II IDA
Inferred from Direct Assay
more info
PubMed 
involved_in positive regulation of transcription by RNA polymerase II IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within positive regulation of transcription by RNA polymerase II ISO
Inferred from Sequence Orthology
more info
PubMed 
involved_in positive regulation of transcription by RNA polymerase II ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of transforming growth factor beta3 production ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within protein phosphorylation ISO
Inferred from Sequence Orthology
more info
PubMed 
involved_in protein stabilization IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within regulation of DNA-templated transcription IDA
Inferred from Direct Assay
more info
PubMed 
involved_in regulation of apoptotic process ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within regulation of cell size IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in regulation of fibroblast proliferation ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of glial cell proliferation ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of testosterone biosynthetic process IDA
Inferred from Direct Assay
more info
PubMed 
involved_in regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in regulation of transcription by RNA polymerase II IDA
Inferred from Direct Assay
more info
PubMed 
involved_in response to erythropoietin ISO
Inferred from Sequence Orthology
more info
 
involved_in response to glucagon IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in response to inorganic substance IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in response to inorganic substance ISO
Inferred from Sequence Orthology
more info
PubMed 
acts_upstream_of_or_within response to organic substance ISO
Inferred from Sequence Orthology
more info
PubMed 
involved_in response to purine-containing compound ISO
Inferred from Sequence Orthology
more info
PubMed 
acts_upstream_of_or_within response to xenobiotic stimulus IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of_or_within rhythmic process IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within secretory granule organization IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in transcription by RNA polymerase II ISO
Inferred from Sequence Orthology
more info
 
involved_in transforming growth factor beta receptor signaling pathway ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within type I pneumocyte differentiation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in visual learning ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
part_of ATF4-CREB1 transcription factor complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of ATF4-CREB1 transcription factor complex IDA
Inferred from Direct Assay
more info
PubMed 
part_of ATF4-CREB1 transcription factor complex ISO
Inferred from Sequence Orthology
more info
 
part_of RNA polymerase II transcription regulator complex IPI
Inferred from Physical Interaction
more info
PubMed 
part_of RNA polymerase II transcription regulator complex ISO
Inferred from Sequence Orthology
more info
 
located_in axon ISO
Inferred from Sequence Orthology
more info
 
part_of chromatin IDA
Inferred from Direct Assay
more info
PubMed 
part_of chromatin IMP
Inferred from Mutant Phenotype
more info
PubMed 
part_of chromatin ISO
Inferred from Sequence Orthology
more info
 
part_of euchromatin ISO
Inferred from Sequence Orthology
more info
 
located_in mitochondrial matrix ISO
Inferred from Sequence Orthology
more info
 
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in nucleoplasm TAS
Traceable Author Statement
more info
 
is_active_in nucleus IDA
Inferred from Direct Assay
more info
PubMed 
located_in nucleus IDA
Inferred from Direct Assay
more info
PubMed 
located_in nucleus ISO
Inferred from Sequence Orthology
more info
PubMed 
located_in nucleus NAS
Non-traceable Author Statement
more info
PubMed 
part_of transcription regulator complex IDA
Inferred from Direct Assay
more info
PubMed 
part_of transcription regulator complex ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
cyclic AMP-responsive element-binding protein 1

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001037726.1NP_001032815.1  cyclic AMP-responsive element-binding protein 1 isoform C

    See identical proteins and their annotated locations for NP_001032815.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (C) lacks an alternate in-frame exon in the 5' coding region and uses a downstream start codon, compared to variant A. The encoded protein (isoform C) has a shorter N-terminus, compared to isoform A.
    Source sequence(s)
    AC166336, AK044992, BY315899, CD776417
    Consensus CDS
    CCDS48280.1
    UniProtKB/TrEMBL
    Q62347
    Related
    ENSMUSP00000132860.2, ENSMUST00000171164.8
    Conserved Domains (2) summary
    cd14690
    Location:231285
    bZIP_CREB1; Basic leucine zipper (bZIP) domain of Cyclic AMP-responsive element-binding protein 1 (CREB1) and similar proteins: a DNA-binding and dimerization domain
    pfam02173
    Location:5997
    pKID; pKID domain
  2. NM_009952.2NP_034082.1  cyclic AMP-responsive element-binding protein 1 isoform B

    See identical proteins and their annotated locations for NP_034082.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (B) includes an alternate in-frame exon in the 5' coding region, compared to variant A, resulting in a longer protein (isoform B), compared to isoform A.
    Source sequence(s)
    AC124361, BB831364, BY315899, CD776417, M95106
    Consensus CDS
    CCDS15004.1
    UniProtKB/TrEMBL
    Q547S9, Q61442
    Related
    ENSMUSP00000140112.2, ENSMUST00000190348.2
    Conserved Domains (2) summary
    cd14690
    Location:285339
    bZIP_CREB1; Basic leucine zipper (bZIP) domain of Cyclic AMP-responsive element-binding protein 1 (CREB1) and similar proteins: a DNA-binding and dimerization domain
    pfam02173
    Location:113151
    pKID; pKID domain
  3. NM_133828.2NP_598589.2  cyclic AMP-responsive element-binding protein 1 isoform A

    See identical proteins and their annotated locations for NP_598589.2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (A) encodes isoform A.
    Source sequence(s)
    AC124361, AK044992, BY315899, BY782293, CD776417
    Consensus CDS
    CCDS15005.1
    UniProtKB/Swiss-Prot
    Q01147
    UniProtKB/TrEMBL
    Q543W0, Q61442
    Related
    ENSMUSP00000084624.5, ENSMUST00000087366.11
    Conserved Domains (2) summary
    cd14690
    Location:271325
    bZIP_CREB1; Basic leucine zipper (bZIP) domain of Cyclic AMP-responsive element-binding protein 1 (CREB1) and similar proteins: a DNA-binding and dimerization domain
    pfam02173
    Location:99137
    pKID; pKID domain

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    64571963..64643707
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006495651.5XP_006495714.1  cyclic AMP-responsive element-binding protein 1 isoform X4

    See identical proteins and their annotated locations for XP_006495714.1

    UniProtKB/Swiss-Prot
    Q01147
    UniProtKB/TrEMBL
    Q543W0, Q61442
    Related
    ENSMUSP00000139995.2, ENSMUST00000185594.7
    Conserved Domains (2) summary
    cd14690
    Location:271325
    bZIP_CREB1; Basic leucine zipper (bZIP) domain of Cyclic AMP-responsive element-binding protein 1 (CREB1) and similar proteins: a DNA-binding and dimerization domain
    pfam02173
    Location:99137
    pKID; pKID domain
  2. XM_006495650.4XP_006495713.1  cyclic AMP-responsive element-binding protein 1 isoform X2

    See identical proteins and their annotated locations for XP_006495713.1

    UniProtKB/TrEMBL
    Q547S9, Q61442
    Related
    ENSMUSP00000059973.6, ENSMUST00000049932.12
    Conserved Domains (2) summary
    cd14690
    Location:285339
    bZIP_CREB1; Basic leucine zipper (bZIP) domain of Cyclic AMP-responsive element-binding protein 1 (CREB1) and similar proteins: a DNA-binding and dimerization domain
    pfam02173
    Location:113151
    pKID; pKID domain
  3. XM_006495654.5XP_006495717.1  cyclic AMP-responsive element-binding protein 1 isoform X7

    UniProtKB/TrEMBL
    P70300
    Conserved Domains (2) summary
    cd14690
    Location:210264
    bZIP_CREB1; Basic leucine zipper (bZIP) domain of Cyclic AMP-responsive element-binding protein 1 (CREB1) and similar proteins: a DNA-binding and dimerization domain
    pfam02173
    Location:99137
    pKID; pKID domain
  4. XM_006495652.5XP_006495715.1  cyclic AMP-responsive element-binding protein 1 isoform X5

    See identical proteins and their annotated locations for XP_006495715.1

    Conserved Domains (2) summary
    cd14690
    Location:245299
    bZIP_CREB1; Basic leucine zipper (bZIP) domain of Cyclic AMP-responsive element-binding protein 1 (CREB1) and similar proteins: a DNA-binding and dimerization domain
    pfam02173
    Location:73111
    pKID; pKID domain
  5. XM_030245776.2XP_030101636.1  cyclic AMP-responsive element-binding protein 1 isoform X10

    Conserved Domains (1) summary
    cd14690
    Location:77131
    bZIP_CREB1; Basic leucine zipper (bZIP) domain of Cyclic AMP-responsive element-binding protein 1 (CREB1) and similar proteins: a DNA-binding and dimerization domain
  6. XM_006495653.4XP_006495716.1  cyclic AMP-responsive element-binding protein 1 isoform X6

    UniProtKB/TrEMBL
    P70300
    Conserved Domains (2) summary
    cd14690
    Location:224278
    bZIP_CREB1; Basic leucine zipper (bZIP) domain of Cyclic AMP-responsive element-binding protein 1 (CREB1) and similar proteins: a DNA-binding and dimerization domain
    pfam02173
    Location:113151
    pKID; pKID domain
  7. XM_017314080.2XP_017169569.1  cyclic AMP-responsive element-binding protein 1 isoform X1

    UniProtKB/TrEMBL
    Q547S9, Q61442
    Conserved Domains (2) summary
    cd14690
    Location:285339
    bZIP_CREB1; Basic leucine zipper (bZIP) domain of Cyclic AMP-responsive element-binding protein 1 (CREB1) and similar proteins: a DNA-binding and dimerization domain
    pfam02173
    Location:113151
    pKID; pKID domain
  8. XM_017314099.2XP_017169588.1  cyclic AMP-responsive element-binding protein 1 isoform X3

    UniProtKB/Swiss-Prot
    Q01147
    UniProtKB/TrEMBL
    Q543W0, Q61442
    Conserved Domains (2) summary
    cd14690
    Location:271325
    bZIP_CREB1; Basic leucine zipper (bZIP) domain of Cyclic AMP-responsive element-binding protein 1 (CREB1) and similar proteins: a DNA-binding and dimerization domain
    pfam02173
    Location:99137
    pKID; pKID domain
  9. XM_036157655.1XP_036013548.1  cyclic AMP-responsive element-binding protein 1 isoform X8

    UniProtKB/TrEMBL
    P70300
    Conserved Domains (2) summary
    cd14690
    Location:210264
    bZIP_CREB1; Basic leucine zipper (bZIP) domain of Cyclic AMP-responsive element-binding protein 1 (CREB1) and similar proteins: a DNA-binding and dimerization domain
    pfam02173
    Location:99137
    pKID; pKID domain
  10. XM_036157665.1XP_036013558.1  cyclic AMP-responsive element-binding protein 1 isoform X9

    UniProtKB/TrEMBL
    P70300
    Conserved Domains (2) summary
    cd14690
    Location:170224
    bZIP_CREB1; Basic leucine zipper (bZIP) domain of Cyclic AMP-responsive element-binding protein 1 (CREB1) and similar proteins: a DNA-binding and dimerization domain
    pfam02173
    Location:5997
    pKID; pKID domain
  11. XM_011238424.3XP_011236726.1  cyclic AMP-responsive element-binding protein 1 isoform X10

    See identical proteins and their annotated locations for XP_011236726.1

    Conserved Domains (1) summary
    cd14690
    Location:77131
    bZIP_CREB1; Basic leucine zipper (bZIP) domain of Cyclic AMP-responsive element-binding protein 1 (CREB1) and similar proteins: a DNA-binding and dimerization domain
  12. XM_011238425.2XP_011236727.1  cyclic AMP-responsive element-binding protein 1 isoform X10

    See identical proteins and their annotated locations for XP_011236727.1

    Conserved Domains (1) summary
    cd14690
    Location:77131
    bZIP_CREB1; Basic leucine zipper (bZIP) domain of Cyclic AMP-responsive element-binding protein 1 (CREB1) and similar proteins: a DNA-binding and dimerization domain
  13. XM_006495655.5XP_006495718.1  cyclic AMP-responsive element-binding protein 1 isoform X11

    Conserved Domains (1) summary
    cd14690
    Location:55109
    bZIP_CREB1; Basic leucine zipper (bZIP) domain of Cyclic AMP-responsive element-binding protein 1 (CREB1) and similar proteins: a DNA-binding and dimerization domain

RNA

  1. XR_004937550.1 RNA Sequence

  2. XR_004937537.1 RNA Sequence

  3. XR_004937559.1 RNA Sequence

  4. XR_004937560.1 RNA Sequence

  5. XR_004937542.1 RNA Sequence