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LOC1278776 polypyrimidine tract-binding protein 2 [ Anopheles gambiae (African malaria mosquito) ]

Gene ID: 1278776, updated on 4-Jan-2024

Summary

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Gene symbol
LOC1278776
Gene description
polypyrimidine tract-binding protein 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Anopheles gambiae
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
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Genomic context

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See LOC1278776 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
23
Annotation release Status Assembly Chr Location
RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) 2 NC_064601.1 (45683189..45955955, complement)

Chromosome 2 - NC_064601.1Genomic Context describing neighboring genes Neighboring gene DNA-binding protein RFX2 Neighboring gene ataxin-8-like Neighboring gene rho GTPase-activating protein 100F Neighboring gene transfer RNA tryptophan (anticodon CCA) Neighboring gene transfer RNA lysine (anticodon UUU) Neighboring gene transfer RNA isoleucine (anticodon AAU) Neighboring gene transfer RNA isoleucine (anticodon AAU) Neighboring gene transfer RNA glycine (anticodon UCC) Neighboring gene uncharacterized LOC133392089 Neighboring gene transfer RNA tryptophan (anticodon CCA) Neighboring gene transfer RNA isoleucine (anticodon AAU) Neighboring gene transfer RNA isoleucine (anticodon AAU)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064601.1 Chromosome 2 Reference idAnoGambNW_F1_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Anopheles gambiae genome: an update. Mongin E, et al. Trends Parasitol, 2004 Feb. PMID 14747013
  2. The genome sequence of the malaria mosquito Anopheles gambiae. Holt RA, et al. Science, 2002 Oct 4. PMID 12364791

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of RNA splicing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypyrimidine tract-binding protein 2; polypyrimidine tract-binding protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference idAnoGambNW_F1_1 Primary Assembly

Genomic

  1. NC_064601.1 Reference idAnoGambNW_F1_1 Primary Assembly

    Range
    45683189..45955955 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_061650468.1 → XP_061506452.1  polypyrimidine tract-binding protein 2 isoform X14

  2. XM_061650463.1 → XP_061506447.1  polypyrimidine tract-binding protein 2 isoform X10

  3. XM_061650462.1 → XP_061506446.1  polypyrimidine tract-binding protein 2 isoform X10

  4. XM_061650466.1 → XP_061506450.1  polypyrimidine tract-binding protein 2 isoform X13

  5. XM_061650464.1 → XP_061506448.1  polypyrimidine tract-binding protein 2 isoform X11

  6. XM_061650458.1 → XP_061506442.1  polypyrimidine tract-binding protein 2 isoform X9

  7. XM_061650465.1 → XP_061506449.1  polypyrimidine tract-binding protein 2 isoform X12

  8. XM_061650456.1 → XP_061506440.1  polypyrimidine tract-binding protein 2 isoform X8

  9. XM_061650467.1 → XP_061506451.1  polypyrimidine tract-binding protein 2 isoform X14

  10. XM_061650459.1 → XP_061506443.1  polypyrimidine tract-binding protein 2 isoform X10

  11. XM_061650460.1 → XP_061506444.1  polypyrimidine tract-binding protein 2 isoform X10

  12. XM_061650461.1 → XP_061506445.1  polypyrimidine tract-binding protein 2 isoform X10

  13. XM_061650448.1 → XP_061506432.1  polypyrimidine tract-binding protein 2 isoform X1

  14. XM_061650451.1 → XP_061506435.1  polypyrimidine tract-binding protein 2 isoform X3

  15. XM_061650450.1 → XP_061506434.1  polypyrimidine tract-binding protein 2 isoform X2

  16. XM_061650447.1 → XP_061506431.1  polypyrimidine tract-binding protein 2 isoform X1

  17. XM_061650452.1 → XP_061506436.1  polypyrimidine tract-binding protein 2 isoform X4

  18. XM_061650449.1 → XP_061506433.1  polypyrimidine tract-binding protein 2 isoform X1

  19. XM_061650455.1 → XP_061506439.1  polypyrimidine tract-binding protein 2 isoform X7

  20. XM_061650453.1 → XP_061506437.1  polypyrimidine tract-binding protein 2 isoform X5

  21. XM_061650454.1 → XP_061506438.1  polypyrimidine tract-binding protein 3 isoform X6

  22. XM_061650470.1 → XP_061506454.1  polypyrimidine tract-binding protein 2 isoform X16

  23. XM_061650469.1 → XP_061506453.1  polypyrimidine tract-binding protein 2 isoform X15

RNA

  1. XR_009765440.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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