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LOC1275942 serine-arginine protein 55 [ Anopheles gambiae (African malaria mosquito) ]

Gene ID: 1275942, updated on 3-Apr-2024

Summary

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Gene symbol
LOC1275942
Gene description
serine-arginine protein 55
Gene type
protein coding
RefSeq status
MODEL
Organism
Anopheles gambiae
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
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Genomic context

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Location:
chromosome: 2
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) 2 NC_064601.1 (56279991..56287684, complement)

Chromosome 2 - NC_064601.1Genomic Context describing neighboring genes Neighboring gene N-alpha-acetyltransferase 80 Neighboring gene lysosomal acid phosphatase Neighboring gene EH domain-containing protein 3 Neighboring gene cyclin-dependent kinase 20

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064601.1 Chromosome 2 Reference idAnoGambNW_F1_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Anopheles gambiae genome: an update. Mongin E, et al. Trends Parasitol, 2004 Feb. PMID 14747013
  2. The genome sequence of the malaria mosquito Anopheles gambiae. Holt RA, et al. Science, 2002 Oct 4. PMID 12364791

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in alternative mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mRNA splice site recognition IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine-arginine protein 55

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference idAnoGambNW_F1_1 Primary Assembly

Genomic

  1. NC_064601.1 Reference idAnoGambNW_F1_1 Primary Assembly

    Range
    56279991..56287684 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003436812.2 → XP_003436860.1  serine-arginine protein 55 isoform X1

    See identical proteins and their annotated locations for XP_003436860.1

    UniProtKB/TrEMBL
    F5HLU5
    Conserved Domains (2) summary
    cd12337
    Location:5 → 74
    RRM1_SRSF4_like; RNA recognition motif 1 (RRM1) found in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins
    cd12600
    Location:118 → 189
    RRM2_SRSF4_like; RNA recognition motif 2 (RRM2) found in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins

  2. XM_003436813.2 → XP_003436861.1  serine-arginine protein 55 isoform X2

    See identical proteins and their annotated locations for XP_003436861.1

    UniProtKB/TrEMBL
    F5HLU6, Q7PPE6
    Conserved Domains (2) summary
    cd12337
    Location:5 → 74
    RRM1_SRSF4_like; RNA recognition motif 1 (RRM1) found in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins
    cd12600
    Location:112 → 183
    RRM2_SRSF4_like; RNA recognition motif 2 (RRM2) found in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins

  3. XM_061644275.1 → XP_061500259.1  serine-arginine protein 55 isoform X1

    UniProtKB/TrEMBL
    F5HLU5

  4. XM_315232.6 → XP_315232.3  serine-arginine protein 55 isoform X2

    See identical proteins and their annotated locations for XP_315232.3

    UniProtKB/TrEMBL
    F5HLU6, Q7PPE6
    Conserved Domains (2) summary
    cd12337
    Location:5 → 74
    RRM1_SRSF4_like; RNA recognition motif 1 (RRM1) found in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins
    cd12600
    Location:112 → 183
    RRM2_SRSF4_like; RNA recognition motif 2 (RRM2) found in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins

  5. XM_003436815.2 → XP_003436863.1  serine-arginine protein 55 isoform X3

    See identical proteins and their annotated locations for XP_003436863.1

    UniProtKB/TrEMBL
    F5HLU7, F5HLV0
    Conserved Domains (2) summary
    cd12337
    Location:5 → 74
    RRM1_SRSF4_like; RNA recognition motif 1 (RRM1) found in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins
    cl17169
    Location:109 → 132
    RRM_SF; RNA recognition motif (RRM) superfamily

  6. XM_061644277.1 → XP_061500261.1  serine-arginine protein 55 isoform X3

    UniProtKB/TrEMBL
    F5HLU7

  7. XM_003436816.2 → XP_003436864.1  serine-arginine protein 55 isoform X5

    See identical proteins and their annotated locations for XP_003436864.1

    UniProtKB/TrEMBL
    F5HLU9, F5HLV0
    Conserved Domains (2) summary
    cd12337
    Location:5 → 74
    RRM1_SRSF4_like; RNA recognition motif 1 (RRM1) found in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins
    cl17169
    Location:103 → 126
    RRM_SF; RNA recognition motif (RRM) superfamily

  8. XM_061644278.1 → XP_061500262.1  serine-arginine protein 55 isoform X4

  9. XM_061644280.1 → XP_061500264.1  serine-arginine protein 55 isoform X6

RNA

  1. XR_009764797.1 RNA Sequence

  2. XR_009764799.1 RNA Sequence

  3. XR_009764796.1 RNA Sequence

  4. XR_009764794.1 RNA Sequence

  5. XR_009764793.1 RNA Sequence

  6. XR_009764798.1 RNA Sequence

  7. XR_009764795.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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