U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC1269532 protein CLP1 homolog [ Anopheles gambiae (African malaria mosquito) ]

Gene ID: 1269532, updated on 11-Apr-2024

Summary

Go to the top of the page Help
Gene symbol
LOC1269532
Gene description
protein CLP1 homolog
Gene type
protein coding
RefSeq status
MODEL
Organism
Anopheles gambiae
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
Also known as
cbc
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 2
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) 2 NC_064601.1 (117897705..117899143, complement)

Chromosome 2 - NC_064601.1Genomic Context describing neighboring genes Neighboring gene syntaxin-1A Neighboring gene GTP-binding nuclear protein Ran Neighboring gene N-acetylneuraminate lyase A Neighboring gene uncharacterized HIT-like protein Synpcc7942_1390 Neighboring gene ankyrin repeat domain-containing protein 54 Neighboring gene spliceosome-associated protein CWC27 homolog

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_064601.1 Chromosome 2 Reference idAnoGambNW_F1_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The Anopheles gambiae genome: an update. Mongin E, et al. Trends Parasitol, 2004 Feb. PMID 14747013
  2. The genome sequence of the malaria mosquito Anopheles gambiae. Holt RA, et al. Science, 2002 Oct 4. PMID 12364791

GeneRIFs: Gene References Into Functions

Pathways from PubChem

Go to the top of the page

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polynucleotide 5'-hydroxyl-kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA splicing, via endonucleolytic cleavage and ligation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mRNA cleavage factor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
protein CLP1 homolog

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference idAnoGambNW_F1_1 Primary Assembly

Genomic

  1. NC_064601.1 Reference idAnoGambNW_F1_1 Primary Assembly

    Range
    117897705..117899143 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_308174.5 → XP_308174.2  protein CLP1 homolog

    See identical proteins and their annotated locations for XP_308174.2

    UniProtKB/Swiss-Prot
    Q7QJW7
    Conserved Domains (2) summary
    COG5623
    Location:14 → 421
    CLP1; Predicted GTPase subunit of the pre-mRNA cleavage complex [Translation, ribosomal structure and biogenesis]
    pfam16575
    Location:119 → 304
    CLP1_P; mRNA cleavage and polyadenylation factor CLP1 P-loop
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q7QJW7.2 GenPept UniProtKB/Swiss-Prot:Q7QJW7

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials