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LOC1269220 small ribosomal subunit protein eS21 [ Anopheles gambiae (African malaria mosquito) ]

Gene ID: 1269220, updated on 4-Jan-2024

Summary

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Gene symbol
LOC1269220
Gene description
small ribosomal subunit protein eS21
Gene type
protein coding
RefSeq status
MODEL
Organism
Anopheles gambiae
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
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Genomic context

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Location:
chromosome: 3
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) 3 NC_064602.1 (33361663..33362573)

Chromosome 3 - NC_064602.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat domain-containing protein 29 Neighboring gene uncharacterized LOC133393582 Neighboring gene uncharacterized LOC1269229 Neighboring gene daxx-like protein Neighboring gene kynurenine formamidase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064602.1 Chromosome 3 Reference idAnoGambNW_F1_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Anopheles gambiae genome: an update. Mongin E, et al. Trends Parasitol, 2004 Feb. PMID 14747013
  2. The genome sequence of the malaria mosquito Anopheles gambiae. Holt RA, et al. Science, 2002 Oct 4. PMID 12364791

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic small ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
small ribosomal subunit protein eS21

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference idAnoGambNW_F1_1 Primary Assembly

Genomic

  1. NC_064602.1 Reference idAnoGambNW_F1_1 Primary Assembly

    Range
    33361663..33362573
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_061659121.1 → XP_061515105.1  small ribosomal subunit protein eS21 isoform X2

  2. XM_307843.5 → XP_307843.4  small ribosomal subunit protein eS21 isoform X1

    See identical proteins and their annotated locations for XP_307843.4

    UniProtKB/TrEMBL
    Q7PTN4
    Conserved Domains (1) summary
    pfam01249
    Location:1 → 80
    Ribosomal_S21e; Ribosomal protein S21e
Nucleotide Protein Strain
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