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Mat1a methionine adenosyltransferase 1A [ Mus musculus (house mouse) ]

Gene ID: 11720, updated on 19-Mar-2024

Summary

Official Symbol
Mat1aprovided by MGI
Official Full Name
methionine adenosyltransferase 1Aprovided by MGI
Primary source
MGI:MGI:88017
See related
Ensembl:ENSMUSG00000037798 AllianceGenome:MGI:88017
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Ams; MAT; SAMS; MATA1; SAMS1; AdoMet
Summary
This gene encodes a member of the AdoMet synthase family. Methionine adenosyltransferase is a product of this gene (the alpha form) and the beta form and catalyzes the formation of S-adenosylmethionine from methionine and ATP.[provided by RefSeq, Jan 2013]
Expression
Restricted expression toward liver adult (RPKM 598.5) See more
Orthologs
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Genomic context

Location:
14 B; 14 22.36 cM
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (40826969..40846385)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (41105012..41124428)

Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E5429 Neighboring gene peroxiredoxin like 2A Neighboring gene STARR-seq mESC enhancer starr_36477 Neighboring gene DPY30 domain containing 2 Neighboring gene DPY30 domain containing 1 Neighboring gene surfactant associated protein A1 Neighboring gene pleckstrin homology domain containing, family F (with FYVE domain) member 2 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (1)  1 citation
  • Endonuclease-mediated (3) 

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables ADP binding ISO
Inferred from Sequence Orthology
more info
 
enables ATP binding ISO
Inferred from Sequence Orthology
more info
 
enables amino acid binding ISO
Inferred from Sequence Orthology
more info
 
enables identical protein binding ISO
Inferred from Sequence Orthology
more info
 
enables magnesium ion binding ISO
Inferred from Sequence Orthology
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables methionine adenosyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables methionine adenosyltransferase activity ISO
Inferred from Sequence Orthology
more info
 
enables methionine adenosyltransferase activity TAS
Traceable Author Statement
more info
PubMed 
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
enables transferase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in S-adenosylmethionine biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in S-adenosylmethionine biosynthetic process ISO
Inferred from Sequence Orthology
more info
 
involved_in methionine catabolic process ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within one-carbon metabolic process IEA
Inferred from Electronic Annotation
more info
 
involved_in protein homotetramerization ISO
Inferred from Sequence Orthology
more info
 
involved_in protein-containing complex assembly ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of methionine adenosyltransferase complex ISO
Inferred from Sequence Orthology
more info
 
located_in nuclear matrix ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
S-adenosylmethionine synthase isoform type-1; S-adenosylmethionine synthase
Names
adoMet synthetase 1
methionine adenosyltransferase I, alpha
NP_598414.1
XP_006518513.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_133653.3NP_598414.1  S-adenosylmethionine synthase isoform type-1

    See identical proteins and their annotated locations for NP_598414.1

    Status: REVIEWED

    Source sequence(s)
    AC124400, AC154597, AK153832, BB807316, BB871001
    Consensus CDS
    CCDS26959.1
    UniProtKB/Swiss-Prot
    Q91X83
    Related
    ENSMUSP00000153488.2, ENSMUST00000225720.2
    Conserved Domains (1) summary
    PTZ00104
    Location:17394
    PTZ00104; S-adenosylmethionine synthase; Provisional

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000080.7 Reference GRCm39 C57BL/6J

    Range
    40826969..40846385
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006518450.3XP_006518513.1  S-adenosylmethionine synthase isoform X1

    See identical proteins and their annotated locations for XP_006518513.1

    UniProtKB/Swiss-Prot
    Q91X83
    Conserved Domains (1) summary
    PTZ00104
    Location:17394
    PTZ00104; S-adenosylmethionine synthase; Provisional