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Vmn1r14 vomeronasal 1 receptor 14 [ Mus musculus (house mouse) ]

Gene ID: 113864, updated on 8-Feb-2024

Summary

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Official Symbol
Vmn1r14provided by MGI
Official Full Name
vomeronasal 1 receptor 14provided by MGI
Primary source
MGI:MGI:2148528
See related
Ensembl:ENSMUSG00000114982 AllianceGenome:MGI:2148528
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
V1rc7
Summary
Predicted to enable signaling receptor activity. Predicted to act upstream of or within sensory perception of chemical stimulus. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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Location:
6 B3; 6 27.82 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (57203140..57211335)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (57226155..57234350)

Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_15998 Neighboring gene vomeronasal 1 receptor, pseudogene 8 Neighboring gene vomeronasal 1 receptor 13 Neighboring gene vomeronasal 1 receptor 15 Neighboring gene vomeronasal 1 receptor, pseudogene 9

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence diversity and genomic organization of vomeronasal receptor genes in the mouse. Del Punta K, et al. Genome Res, 2000 Dec. PMID 11116090, Free PMC Article
  2. Manual annotation and analysis of the defensin gene cluster in the C57BL/6J mouse reference genome. Amid C, et al. BMC Genomics, 2009 Dec 15. PMID 20003482, Free PMC Article
  3. Extreme variability among mammalian V1R gene families. Young JM, et al. Genome Res, 2010 Jan. PMID 19952141, Free PMC Article
  4. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article
  5. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, et al. Nature, 2002 Dec 5. PMID 12466851

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables signaling receptor activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within sensory perception of chemical stimulus TAS
Traceable Author Statement
more info
 PubMed 

General protein information

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Preferred Names
vomeronasal 1 receptor, C7
Names
vomernasal 1 receptor Vmn1r14

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_053237.2 → NP_444467.2  vomeronasal 1 receptor, C7

    See identical proteins and their annotated locations for NP_444467.2

    Status: VALIDATED

    Source sequence(s)
    AC153696
    Consensus CDS
    CCDS20177.1
    UniProtKB/TrEMBL
    H3BJ46, Q9EQ36
    Related
    ENSMUSP00000135207.3, ENSMUST00000177435.3
    Conserved Domains (1) summary
    pfam03402
    Location:36 → 296
    V1R; Vomeronasal organ pheromone receptor family, V1R

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000072.7 Reference GRCm39 C57BL/6J

    Range
    57203140..57211335
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017321339.1 → XP_017176828.1  vomeronasal 1 receptor, C7 isoform X1

    UniProtKB/TrEMBL
    Q9EQ36
    Conserved Domains (2) summary
    cd14964
    Location:5 → 28
    7tm_GPCRs; TM helix 1 [structural motif]
    cl28897
    Location:5 → 289
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
Nucleotide Protein Strain
Heading Accession and Version

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