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Vmn1r-ps8 vomeronasal 1 receptor, pseudogene 8 [ Mus musculus (house mouse) ]

Gene ID: 113861, updated on 8-Feb-2024

Summary

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Official Symbol
Vmn1r-ps8provided by MGI
Official Full Name
vomeronasal 1 receptor, pseudogene 8provided by MGI
Primary source
MGI:MGI:2148525
See related
Ensembl:ENSMUSG00000093728 AllianceGenome:MGI:2148525
Gene type
pseudo
RefSeq status
INFERRED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
V1rc4
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Genomic context

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See Vmn1r-ps8 in Genome Data Viewer
Location:
6 B3; 6 27.82 cM
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (57165473..57166426)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (57188488..57189441)

Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene vomeronasal 1 receptor 11 Neighboring gene vomeronasal 1 receptor 12 Neighboring gene STARR-seq mESC enhancer starr_15998 Neighboring gene vomeronasal 1 receptor 13 Neighboring gene vomeronasal 1 receptor 14

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence diversity and genomic organization of vomeronasal receptor genes in the mouse. Del Punta K, et al. Genome Res, 2000 Dec. PMID 11116090, Free PMC Article
  2. Manual annotation and analysis of the defensin gene cluster in the C57BL/6J mouse reference genome. Amid C, et al. BMC Genomics, 2009 Dec 15. PMID 20003482, Free PMC Article
  3. Extreme variability among mammalian V1R gene families. Young JM, et al. Genome Res, 2010 Jan. PMID 19952141, Free PMC Article
  4. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article
  5. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, et al. Nature, 2002 Dec 5. PMID 12466851

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Other Names

  • vomernasal 1 receptor Vmn1r-ps8 pseudogene
  • vomeronasal 1 receptor, C4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_006497.3 

    Range
    101..1054
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000072.7 Reference GRCm39 C57BL/6J

    Range
    57165473..57166426
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_053234.1: Suppressed sequence

    Description
    NM_053234.1: This RefSeq was permanently suppressed because it is now thought that this gene is a pseudogene in C57BL/6.
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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