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Celf4 CUGBP, Elav-like family member 4 [ Mus musculus (house mouse) ]

Gene ID: 108013, updated on 5-Mar-2024

Summary

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Official Symbol
Celf4provided by MGI
Official Full Name
CUGBP, Elav-like family member 4provided by MGI
Primary source
MGI:MGI:1932407
See related
Ensembl:ENSMUSG00000024268 AllianceGenome:MGI:1932407
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Brul4; Brunol4; BRUNOL-4; A230070D14Rik; C130060B05Rik
Summary
Enables mRNA binding activity. Acts upstream of or within several processes, including mRNA splice site selection; negative regulation of excitatory postsynaptic potential; and negative regulation of mRNA splicing, via spliceosome. Located in cytoplasm and nucleus. Is expressed in several structures, including central nervous system; embryo ectoderm; mammary gland; retina; and spleen. Orthologous to human CELF4 (CUGBP Elav-like family member 4). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in frontal lobe adult (RPKM 30.6), CNS E18 (RPKM 25.8) and 5 other tissues See more
Orthologs
human all
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Genomic context

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See Celf4 in Genome Data Viewer
Location:
18 A2; 18 13.92 cM
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 18 NC_000084.7 (25610677..25887577, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 18 NC_000084.6 (25477620..25754520, complement)

Chromosome 18 - NC_000084.7Genomic Context describing neighboring genes Neighboring gene formin homology 2 domain containing 3 Neighboring gene STARR-seq mESC enhancer starr_44075 Neighboring gene 39S ribosomal protein L42, mitochondrial pseudogene Neighboring gene expressed sequence AW554918 Neighboring gene tubulin polyglutamylase complex subunit 2 Neighboring gene STARR-seq mESC enhancer starr_44077 Neighboring gene STARR-seq mESC enhancer starr_44078 Neighboring gene STARR-seq mESC enhancer starr_44080 Neighboring gene STARR-positive B cell enhancer ABC_E3225 Neighboring gene predicted gene, 32825 Neighboring gene predicted gene 3227 Neighboring gene predicted gene, 32896 Neighboring gene predicted gene, 33228 Neighboring gene predicted gene 7847 Neighboring gene STARR-seq mESC enhancer starr_44087 Neighboring gene STARR-seq mESC enhancer starr_44088 Neighboring gene STARR-seq mESC enhancer starr_44090 Neighboring gene STARR-seq mESC enhancer starr_44091 Neighboring gene STARR-seq mESC enhancer starr_44092 Neighboring gene predicted gene, 23674

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. CELF4 regulates spine formation and depression-like behaviors of mice. Shen Y, et al. Biochem Biophys Res Commun, 2022 May 21. PMID 35306363
  2. CELF4 regulates translation and local abundance of a vast set of mRNAs, including genes associated with regulation of synaptic function. Wagnon JL, et al. PLoS Genet, 2012. PMID 23209433, Free PMC Article
  3. Cardiac tissue-specific repression of CELF activity disrupts alternative splicing and causes cardiomyopathy. Ladd AN, et al. Mol Cell Biol, 2005 Jul. PMID 15988035, Free PMC Article
  4. Identification and characterization of murine Brunol4, a new member of the elav/bruno family. Meins M, et al. Cytogenet Genome Res, 2002. PMID 12438720
  5. Aberrant sodium channel activity in the complex seizure disorder of Celf4 mutant mice. Sun W, et al. J Physiol, 2013 Jan 1. PMID 23090952, Free PMC Article

See all (36) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Celf4 controls mRNA translation underlying synaptic development in the prenatal mammalian neocortex.
    Title: Celf4 controls mRNA translation underlying synaptic development in the prenatal mammalian neocortex.
  2. CELF4 regulates spine formation and depression-like behaviors of mice.
    Title: CELF4 regulates spine formation and depression-like behaviors of mice.
  3. Celf4 might be regulating alternative early in retinal development.
    Title: The expression analysis of Sfrs10 and Celf4 during mouse retinal development.
  4. we suggest that CELF4 deficiency leads to abnormal neuronal function by combining a specific effect on neuronal excitation with a general impairment of synaptic transmission.
    Title: CELF4 regulates translation and local abundance of a vast set of mRNAs, including genes associated with regulation of synaptic function.
  5. Data point strongly to the conclusion that Celf4 deletion primarily from excitatory neurons promotes convulsive seizure phenotypes.
    Title: Etiology of a genetically complex seizure disorder in Celf4 mutant mice.
  6. Brunol4 deficiency in mice results in a complex seizure phenotype, likely due to the coordinate dysregulation of several molecules, providing a unique new animal model of epilepsy
    Title: Complex seizure disorder caused by Brunol4 deficiency in mice.
  7. CELF protein activity is required for normal alternative splicing in the heart in vivo and normal CELF-mediated alternative splicing regulation is in turn required for normal cardiac function.
    Title: Cardiac tissue-specific repression of CELF activity disrupts alternative splicing and causes cardiomyopathy.
  8. cloning and characterization
    Title: Identification and characterization of murine Brunol4, a new member of the elav/bruno family.
Submit: New GeneRIF Correction

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
  
enables mRNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables mRNA binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
  
enables pre-mRNA binding ISO
Inferred from Sequence Orthology
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within RNA splicing IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of excitatory postsynaptic potential IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within in utero embryonic development IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within mRNA processing IEA
Inferred from Electronic Annotation
more info
  
involved_in mRNA splice site recognition IBA
Inferred from Biological aspect of Ancestor
more info
  
acts_upstream_of_or_within mRNA splice site recognition IDA
Inferred from Direct Assay
more info
 PubMed 
acts_upstream_of_or_within negative regulation of excitatory postsynaptic potential IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within negative regulation of mRNA splicing, via spliceosome IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in positive regulation of mRNA splicing, via spliceosome ISO
Inferred from Sequence Orthology
more info
  
involved_in regulation of alternative mRNA splicing, via spliceosome IBA
Inferred from Biological aspect of Ancestor
more info
  
acts_upstream_of_or_within regulation of alternative mRNA splicing, via spliceosome ISO
Inferred from Sequence Orthology
more info
  
acts_upstream_of_or_within regulation of retina development in camera-type eye IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in cytoplasm IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
  
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus ISO
Inferred from Sequence Orthology
more info
  
located_in nucleus ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
part_of ribonucleoprotein complex IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
CUGBP Elav-like family member 4
Names
CUG-BP- and ETR-3-like factor 4
RNA-binding protein BRUNOL-4
bruno-like 4, RNA binding protein
bruno-like protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001146292.2 → NP_001139764.1  CUGBP Elav-like family member 4 isoform 22

    See identical proteins and their annotated locations for NP_001139764.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) encodes isoform (22, also known as A).
    Source sequence(s)
    AC121094, AF515450, AK038871, AK048427, AK078071, BC048405, CX242398
    Consensus CDS
    CCDS50241.1
    UniProtKB/Swiss-Prot
    Q7TSY6
    Related
    ENSMUSP00000111483.3, ENSMUST00000115816.3
    Conserved Domains (3) summary
    cd12639
    Location:415 → 493
    RRM3_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 (RRM1) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:150 → 230
    RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins

  2. NM_001146293.2 → NP_001139765.1  CUGBP Elav-like family member 4 isoform 35

    See identical proteins and their annotated locations for NP_001139765.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) encodes isoform (37, also known as B).
    Source sequence(s)
    AC121094, AF515450, AK038871, AK048427, AK078071, BC052744, CX242398
    Consensus CDS
    CCDS89205.1
    UniProtKB/Swiss-Prot
    Q7TSY6
    Related
    ENSMUSP00000153326.2, ENSMUST00000223704.2
    Conserved Domains (4) summary
    TIGR01628
    Location:56 → 378
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 (RRM1) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:151 → 231
    RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cl17169
    Location:416 → 474
    RRM_SF; RNA recognition motif (RRM) superfamily

  3. NM_001146294.2 → NP_001139766.1  CUGBP Elav-like family member 4 isoform 29

    See identical proteins and their annotated locations for NP_001139766.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) encodes isoform (29, also known as C).
    Source sequence(s)
    AC121094, AF515450, AK038871, AK048427, AK078071, BE861427, CX242398
    Consensus CDS
    CCDS89206.1
    UniProtKB/Swiss-Prot
    Q7TSY6
    Related
    ENSMUSP00000025117.8, ENSMUST00000025117.14
    Conserved Domains (3) summary
    cd12639
    Location:406 → 484
    RRM3_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 (RRM1) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:140 → 220
    RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins

  4. NM_001174074.2 → NP_001167545.1  CUGBP Elav-like family member 4 isoform 51

    See identical proteins and their annotated locations for NP_001167545.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (6) encodes isoform (51, also known as F).
    Source sequence(s)
    AC121094, AC144938, AK051458, BC052744
    Consensus CDS
    CCDS89204.1
    UniProtKB/Swiss-Prot
    Q7TSY6
    Related
    ENSMUSP00000153258.2, ENSMUST00000224553.2
    Conserved Domains (3) summary
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:151 → 231
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cl25887
    Location:56 → 452
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]

  5. NM_001362275.1 → NP_001349204.1  CUGBP Elav-like family member 4 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938
    Conserved Domains (3) summary
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:150 → 230
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cl17169
    Location:415 → 463
    RRM_SF; RNA recognition motif (RRM) superfamily

  6. NM_001362276.1 → NP_001349205.1  CUGBP Elav-like family member 4 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938
    Conserved Domains (4) summary
    TIGR01628
    Location:56 → 378
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:151 → 231
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cl17169
    Location:416 → 444
    RRM_SF; RNA recognition motif (RRM) superfamily

  7. NM_001362277.1 → NP_001349206.1  CUGBP Elav-like family member 4 isoform 3

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938
    Conserved Domains (3) summary
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:150 → 230
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cl17169
    Location:415 → 443
    RRM_SF; RNA recognition motif (RRM) superfamily

  8. NM_001362278.1 → NP_001349207.1  CUGBP Elav-like family member 4 isoform 4

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938
    Conserved Domains (3) summary
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:140 → 220
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cl17169
    Location:404 → 452
    RRM_SF; RNA recognition motif (RRM) superfamily

  9. NM_001362279.1 → NP_001349208.1  CUGBP Elav-like family member 4 isoform 5

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938
    Conserved Domains (4) summary
    TIGR01628
    Location:56 → 378
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:151 → 231
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cl17169
    Location:417 → 445
    RRM_SF; RNA recognition motif (RRM) superfamily

  10. NM_001362280.1 → NP_001349209.1  CUGBP Elav-like family member 4 isoform 6

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938
    Conserved Domains (4) summary
    TIGR01628
    Location:56 → 378
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:151 → 231
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cl17169
    Location:416 → 444
    RRM_SF; RNA recognition motif (RRM) superfamily

  11. NM_001362281.1 → NP_001349210.1  CUGBP Elav-like family member 4 isoform 7

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938
    Conserved Domains (3) summary
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:150 → 230
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cl17169
    Location:416 → 444
    RRM_SF; RNA recognition motif (RRM) superfamily

  12. NM_001362282.1 → NP_001349211.1  CUGBP Elav-like family member 4 isoform 8

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938
    Conserved Domains (3) summary
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:150 → 230
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cl17169
    Location:415 → 443
    RRM_SF; RNA recognition motif (RRM) superfamily

  13. NM_001362283.1 → NP_001349212.1  CUGBP Elav-like family member 4 isoform 9

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938
    Conserved Domains (3) summary
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:151 → 231
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cl17169
    Location:415 → 443
    RRM_SF; RNA recognition motif (RRM) superfamily

  14. NM_001362284.1 → NP_001349213.1  CUGBP Elav-like family member 4 isoform 10

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938
    Conserved Domains (3) summary
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:140 → 220
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cl17169
    Location:405 → 433
    RRM_SF; RNA recognition motif (RRM) superfamily

  15. NM_001362285.1 → NP_001349214.1  CUGBP Elav-like family member 4 isoform 11

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938
    Conserved Domains (3) summary
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:150 → 230
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cl17169
    Location:414 → 442
    RRM_SF; RNA recognition motif (RRM) superfamily

  16. NM_001362286.1 → NP_001349215.1  CUGBP Elav-like family member 4 isoform 12

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938
    Conserved Domains (3) summary
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:142 → 222
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cl17169
    Location:407 → 435
    RRM_SF; RNA recognition motif (RRM) superfamily

  17. NM_001362288.1 → NP_001349217.1  CUGBP Elav-like family member 4 isoform 13

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938
    Conserved Domains (3) summary
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:140 → 220
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cl17169
    Location:406 → 434
    RRM_SF; RNA recognition motif (RRM) superfamily

  18. NM_001362289.1 → NP_001349218.1  CUGBP Elav-like family member 4 isoform 14

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938
    Conserved Domains (3) summary
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:140 → 220
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cl17169
    Location:405 → 433
    RRM_SF; RNA recognition motif (RRM) superfamily

  19. NM_001362290.1 → NP_001349219.1  CUGBP Elav-like family member 4 isoform 15

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938
    Conserved Domains (3) summary
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:140 → 220
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cl17169
    Location:405 → 433
    RRM_SF; RNA recognition motif (RRM) superfamily

  20. NM_001362291.1 → NP_001349220.1  CUGBP Elav-like family member 4 isoform 16

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938
    Conserved Domains (3) summary
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:140 → 220
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cl17169
    Location:404 → 432
    RRM_SF; RNA recognition motif (RRM) superfamily

  21. NM_001362292.1 → NP_001349221.1  CUGBP Elav-like family member 4 isoform 17

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938
    Conserved Domains (3) summary
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:140 → 220
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12639
    Location:405 → 501
    RRM3_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins

  22. NM_001362293.1 → NP_001349222.1  CUGBP Elav-like family member 4 isoform 18

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938
    Conserved Domains (3) summary
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:140 → 220
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cl17169
    Location:378 → 422
    RRM_SF; RNA recognition motif (RRM) superfamily

  23. NM_001362294.1 → NP_001349223.1  CUGBP Elav-like family member 4 isoform 19

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938
    Conserved Domains (3) summary
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:151 → 231
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cl25887
    Location:56 → 378
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]

  24. NM_001362295.1 → NP_001349224.1  CUGBP Elav-like family member 4 isoform 20

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938
    Conserved Domains (3) summary
    cd12639
    Location:416 → 494
    RRM3_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 (RRM1) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:150 → 230
    RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins

  25. NM_001362297.1 → NP_001349226.1  CUGBP Elav-like family member 4 isoform 21

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938
    Conserved Domains (4) summary
    TIGR01628
    Location:56 → 378
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12639
    Location:416 → 494
    RRM3_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 (RRM1) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:151 → 231
    RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins

  26. NM_001362299.1 → NP_001349228.1  CUGBP Elav-like family member 4 isoform 23

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938
    Conserved Domains (3) summary
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:151 → 231
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12639
    Location:415 → 493
    RRM3_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins

  27. NM_001362300.1 → NP_001349229.1  CUGBP Elav-like family member 4 isoform 24

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938
    Conserved Domains (3) summary
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:150 → 230
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12639
    Location:415 → 493
    RRM3_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins

  28. NM_001362301.1 → NP_001349230.1  CUGBP Elav-like family member 4 isoform 25

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938
    Conserved Domains (4) summary
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:151 → 231
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cl17169
    Location:416 → 490
    RRM_SF; RNA recognition motif (RRM) superfamily
    cl25887
    Location:56 → 378
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]

  29. NM_001362302.1 → NP_001349231.1  CUGBP Elav-like family member 4 isoform 26

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938
    Conserved Domains (3) summary
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:140 → 226
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12639
    Location:411 → 489
    RRM3_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins

  30. NM_001362303.1 → NP_001349232.1  CUGBP Elav-like family member 4 isoform 27

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938
    Conserved Domains (3) summary
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:150 → 230
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cl17169
    Location:415 → 489
    RRM_SF; RNA recognition motif (RRM) superfamily

  31. NM_001362304.1 → NP_001349233.1  CUGBP Elav-like family member 4 isoform 28

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938
    Conserved Domains (3) summary
    cd12639
    Location:406 → 484
    RRM3_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 (RRM1) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:141 → 221
    RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins

  32. NM_001362308.1 → NP_001349237.1  CUGBP Elav-like family member 4 isoform 30

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938
    Conserved Domains (3) summary
    cd12639
    Location:405 → 483
    RRM3_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 (RRM1) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:140 → 220
    RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins

  33. NM_001362309.1 → NP_001349238.1  CUGBP Elav-like family member 4 isoform 31

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938
    Conserved Domains (3) summary
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:140 → 220
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12639
    Location:404 → 482
    RRM3_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins

  34. NM_001362310.1 → NP_001349239.1  CUGBP Elav-like family member 4 isoform 32

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938
    Conserved Domains (3) summary
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:140 → 220
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cl17169
    Location:405 → 481
    RRM_SF; RNA recognition motif (RRM) superfamily

  35. NM_001362311.1 → NP_001349240.1  CUGBP Elav-like family member 4 isoform 33

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938
    UniProtKB/Swiss-Prot
    Q7TSY6, Q80Y76, Q811Z7, Q8BKM2, Q8BLM9, Q8BXA2, Q99PE0
    Conserved Domains (4) summary
    TIGR01628
    Location:56 → 378
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 (RRM1) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:151 → 231
    RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cl17169
    Location:417 → 475
    RRM_SF; RNA recognition motif (RRM) superfamily

  36. NM_001362313.1 → NP_001349242.1  CUGBP Elav-like family member 4 isoform 34

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938
    Conserved Domains (3) summary
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 (RRM1) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:150 → 230
    RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cl17169
    Location:416 → 474
    RRM_SF; RNA recognition motif (RRM) superfamily

  37. NM_001362315.1 → NP_001349244.1  CUGBP Elav-like family member 4 isoform 35

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938
    Consensus CDS
    CCDS89205.1
    Conserved Domains (4) summary
    TIGR01628
    Location:56 → 378
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 (RRM1) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:151 → 231
    RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cl17169
    Location:416 → 474
    RRM_SF; RNA recognition motif (RRM) superfamily

  38. NM_001362316.1 → NP_001349245.1  CUGBP Elav-like family member 4 isoform 36

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938
    Conserved Domains (3) summary
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:151 → 231
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cl17169
    Location:416 → 474
    RRM_SF; RNA recognition motif (RRM) superfamily

  39. NM_001362322.1 → NP_001349251.1  CUGBP Elav-like family member 4 isoform 39

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938
    Conserved Domains (3) summary
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:151 → 231
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cl17169
    Location:415 → 473
    RRM_SF; RNA recognition motif (RRM) superfamily

  40. NM_001362323.1 → NP_001349252.1  CUGBP Elav-like family member 4 isoform 40

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938
    Conserved Domains (3) summary
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:150 → 230
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cl17169
    Location:415 → 473
    RRM_SF; RNA recognition motif (RRM) superfamily

  41. NM_001362324.1 → NP_001349253.1  CUGBP Elav-like family member 4 isoform 42

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938
    Conserved Domains (3) summary
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:150 → 230
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cl17169
    Location:414 → 472
    RRM_SF; RNA recognition motif (RRM) superfamily

  42. NM_001362325.1 → NP_001349254.1  CUGBP Elav-like family member 4 isoform 43

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938
    Conserved Domains (3) summary
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 (RRM1) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:141 → 221
    RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cl17169
    Location:407 → 465
    RRM_SF; RNA recognition motif (RRM) superfamily

  43. NM_001362326.1 → NP_001349255.1  CUGBP Elav-like family member 4 isoform 44

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938
    Conserved Domains (3) summary
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 (RRM1) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:140 → 220
    RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cl17169
    Location:406 → 464
    RRM_SF; RNA recognition motif (RRM) superfamily

  44. NM_001362327.1 → NP_001349256.1  CUGBP Elav-like family member 4 isoform 45

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938
    Conserved Domains (3) summary
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 (RRM1) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:141 → 221
    RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cl17169
    Location:406 → 464
    RRM_SF; RNA recognition motif (RRM) superfamily

  45. NM_001362328.1 → NP_001349257.1  CUGBP Elav-like family member 4 isoform 46

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938
    Conserved Domains (3) summary
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 (RRM1) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:140 → 220
    RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cl17169
    Location:405 → 463
    RRM_SF; RNA recognition motif (RRM) superfamily

  46. NM_001362329.1 → NP_001349258.1  CUGBP Elav-like family member 4 isoform 47

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938
    Conserved Domains (3) summary
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:141 → 221
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cl17169
    Location:405 → 463
    RRM_SF; RNA recognition motif (RRM) superfamily

  47. NM_001362330.1 → NP_001349259.1  CUGBP Elav-like family member 4 isoform 48

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938
    Conserved Domains (3) summary
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:140 → 220
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cl17169
    Location:404 → 462
    RRM_SF; RNA recognition motif (RRM) superfamily

  48. NM_001362331.1 → NP_001349260.1  CUGBP Elav-like family member 4 isoform 49

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938
    Conserved Domains (4) summary
    TIGR01628
    Location:56 → 378
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 (RRM1) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:151 → 231
    RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cl17169
    Location:416 → 456
    RRM_SF; RNA recognition motif (RRM) superfamily

  49. NM_001362332.1 → NP_001349261.1  CUGBP Elav-like family member 4 isoform 50

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938
    Conserved Domains (3) summary
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 (RRM1) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:150 → 230
    RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cl17169
    Location:415 → 455
    RRM_SF; RNA recognition motif (RRM) superfamily

  50. NM_001362334.1 → NP_001349263.1  CUGBP Elav-like family member 4 isoform 52

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938
    Conserved Domains (3) summary
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:142 → 222
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cl25887
    Location:56 → 444
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]

  51. NM_001362335.1 → NP_001349264.1  CUGBP Elav-like family member 4 isoform 53

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938
    Conserved Domains (3) summary
    TIGR01661
    Location:56 → 443
    ELAV_HUD_SF; ELAV/HuD family splicing factor
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 (RRM1) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:141 → 221
    RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins

  52. NM_001362336.1 → NP_001349265.1  CUGBP Elav-like family member 4 isoform 54

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938
    Conserved Domains (3) summary
    TIGR01661
    Location:56 → 442
    ELAV_HUD_SF; ELAV/HuD family splicing factor
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 (RRM1) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:140 → 220
    RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins

  53. NM_001362337.1 → NP_001349266.1  CUGBP Elav-like family member 4 isoform 55

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938
    Conserved Domains (3) summary
    TIGR01628
    Location:30 → 254
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12635
    Location:27 → 107
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cl17169
    Location:293 → 351
    RRM_SF; RNA recognition motif (RRM) superfamily

  54. NM_133195.4 → NP_573458.2  CUGBP Elav-like family member 4 isoform 38

    See identical proteins and their annotated locations for NP_573458.2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (4) encodes isoform (41, also known as D).
    Source sequence(s)
    AC121094, AF515450, AK038871, AK048427, AK078071, CX242398
    Consensus CDS
    CCDS29106.1
    UniProtKB/Swiss-Prot
    Q7TSY6
    Related
    ENSMUSP00000153226.2, ENSMUST00000225477.2
    Conserved Domains (3) summary
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 (RRM1) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:150 → 230
    RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cl17169
    Location:415 → 473
    RRM_SF; RNA recognition motif (RRM) superfamily

RNA

  1. NR_155522.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938

  2. NR_155523.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938

  3. NR_155524.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938

  4. NR_155525.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938

  5. NR_155526.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938

  6. NR_155527.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938

  7. NR_155528.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938

  8. NR_155529.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938

  9. NR_155530.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938

  10. NR_155531.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938

  11. NR_155532.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938

  12. NR_155533.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC121094, AC144938

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000084.7 Reference GRCm39 C57BL/6J

    Range
    25610677..25887577 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030250270.1 → XP_030106130.1  CUGBP Elav-like family member 4 isoform X8

    Conserved Domains (3) summary
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 (RRM1) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:140 → 220
    RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cl17169
    Location:406 → 446
    RRM_SF; RNA recognition motif (RRM) superfamily

  2. XM_030250269.1 → XP_030106129.1  CUGBP Elav-like family member 4 isoform X2

    Conserved Domains (3) summary
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:141 → 221
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cl17169
    Location:406 → 434
    RRM_SF; RNA recognition motif (RRM) superfamily

  3. XM_006525518.3 → XP_006525581.1  CUGBP Elav-like family member 4 isoform X7

    See identical proteins and their annotated locations for XP_006525581.1

    Conserved Domains (3) summary
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 (RRM1) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:141 → 221
    RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cl17169
    Location:407 → 447
    RRM_SF; RNA recognition motif (RRM) superfamily

  4. XM_030250268.1 → XP_030106128.1  CUGBP Elav-like family member 4 isoform X1

    Conserved Domains (3) summary
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:141 → 221
    RRM2_CELF3_4_5_6; RNA recognition motif 2 in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cl17169
    Location:407 → 435
    RRM_SF; RNA recognition motif (RRM) superfamily

  5. XM_006525513.3 → XP_006525576.1  CUGBP Elav-like family member 4 isoform X4

    Conserved Domains (3) summary
    cd12639
    Location:407 → 485
    RRM3_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 (RRM1) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:141 → 221
    RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins

  6. XM_006525517.3 → XP_006525580.1  CUGBP Elav-like family member 4 isoform X6

    See identical proteins and their annotated locations for XP_006525580.1

    Conserved Domains (3) summary
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 (RRM1) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:150 → 230
    RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cl17169
    Location:416 → 456
    RRM_SF; RNA recognition motif (RRM) superfamily

  7. XM_006525515.3 → XP_006525578.1  CUGBP Elav-like family member 4 isoform X5

    See identical proteins and their annotated locations for XP_006525578.1

    Conserved Domains (4) summary
    TIGR01628
    Location:56 → 378
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 (RRM1) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:151 → 231
    RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cl17169
    Location:417 → 457
    RRM_SF; RNA recognition motif (RRM) superfamily

  8. XM_006525511.3 → XP_006525574.1  CUGBP Elav-like family member 4 isoform X3

    Conserved Domains (4) summary
    TIGR01628
    Location:56 → 378
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12639
    Location:417 → 495
    RRM3_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12632
    Location:49 → 135
    RRM1_CELF3_4_5_6; RNA recognition motif 1 (RRM1) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cd12635
    Location:151 → 231
    RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins

  9. XM_036160940.1 → XP_036016833.1  CUGBP Elav-like family member 4 isoform X11

    Conserved Domains (3) summary
    TIGR01628
    Location:21 → 245
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12635
    Location:18 → 98
    RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cl17169
    Location:283 → 341
    RRM_SF; RNA recognition motif (RRM) superfamily

  10. XM_036160939.1 → XP_036016832.1  CUGBP Elav-like family member 4 isoform X10

    Conserved Domains (3) summary
    TIGR01628
    Location:26 → 255
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12635
    Location:28 → 108
    RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    cl17169
    Location:293 → 351
    RRM_SF; RNA recognition motif (RRM) superfamily

  11. XM_036160938.1 → XP_036016831.1  CUGBP Elav-like family member 4 isoform X9

    Conserved Domains (3) summary
    cd12639
    Location:293 → 371
    RRM3_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins
    TIGR01661
    Location:31 → 378
    ELAV_HUD_SF; ELAV/HuD family splicing factor
    cd12635
    Location:28 → 108
    RRM2_CELF3_4_5_6; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and similar proteins

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001146295.1: Suppressed sequence

    Description
    NM_001146295.1: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q7TSY6.2 GenPept UniProtKB/Swiss-Prot:Q7TSY6

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