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ALDH1 aldehyde dehydrogenase, cytosolic 1-like [ Elephantulus edwardii (Cape elephant shrew) ]

Gene ID: 102867337, updated on 22-Oct-2023

Summary

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Gene symbol
ALDH1
Gene description
aldehyde dehydrogenase, cytosolic 1-like
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Elephantulus edwardii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Macroscelidea; Macroscelididae; Elephantulus
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Genomic context

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See ALDH1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current EleEdw1.0 (GCF_000299155.1) Unplaced Scaffold NW_006399891.1 (944485..984315, complement)

NW_006399891.1Genomic Context describing neighboring genes Neighboring gene retinal dehydrogenase 1-like Neighboring gene retinal dehydrogenase 1-like Neighboring gene probable guanine nucleotide exchange factor MCF2L2-like Neighboring gene transmembrane channel-like 1 Neighboring gene gem (nuclear organelle) associated protein 8 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006399891 unplaced scaffold reference EleEdw1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A retinaldehyde dehydrogenase as a structural protein in a mammalian eye lens. Gene recruitment of eta-crystallin. Graham C, et al. J Biol Chem, 1996 Jun 28. PMID 8663049
  2. Crystal structure of eta-crystallin: adaptation of a class 1 aldehyde dehydrogenase for a new role in the eye lens. Bateman OA, et al. Biochemistry, 2003 Apr 22. PMID 12693930

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables benzaldehyde dehydrogenase (NAD+) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aldehyde dehydrogenase, cytosolic 1; aldehyde dehydrogenase, cytosolic 1-like
Names
ALDH class 1
ETA-crystallin
aldehyde dehydrogenase 1/eta-crystallin
XP_006894444.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001290159.1 → NP_001277088.1  aldehyde dehydrogenase, cytosolic 1

    See identical proteins and their annotated locations for NP_001277088.1

    Status: PROVISIONAL

    Source sequence(s)
    U02483
    UniProtKB/Swiss-Prot
    Q28399
    Conserved Domains (1) summary
    cd07141
    Location:15 → 495
    ALDH_F1AB_F2_RALDH1; NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like

RefSeqs of Annotated Genomes: Elephantulus edwardii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EleEdw1.0

Genomic

  1. NW_006399891.1 Reference EleEdw1.0

    Range
    944485..984315 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006894382.1 → XP_006894444.1  aldehyde dehydrogenase, cytosolic 1-like

    Conserved Domains (1) summary
    cd07141
    Location:15 → 495
    ALDH_F1AB_F2_RALDH1; NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q28399.1 GenPept UniProtKB/Swiss-Prot:Q28399

Gene LinkOut

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Molecular Biology Databases
Research Materials