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POLR2K RNA polymerase II, I and III subunit K [ Canis lupus familiaris (dog) ]

Gene ID: 100688583, updated on 8-Mar-2024

Summary

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Official Symbol
POLR2Kprovided by VGNC
Official Full Name
RNA polymerase II, I and III subunit Kprovided by VGNC
Primary source
VGNC:VGNC:101440
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 13
Exon count:
6
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 13 NC_051817.1 (2210619..2213385)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 13 NC_006595.4 (2054931..2057697)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 13 NC_049234.1 (2167859..2170628)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 13 NC_049273.1 (2054820..2057586)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 13 NC_049754.1 (2166853..2169621)

Chromosome 13 - NC_051817.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L27a-like Neighboring gene F-box protein 43 Neighboring gene sperm associated antigen 1 Neighboring gene 40S ribosomal protein S2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-directed 5'-3' RNA polymerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RNA polymerase I complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of RNA polymerase II, core complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of RNA polymerase III complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA-directed RNA polymerases I, II, and III subunit RPABC4
Names
RNA polymerase II subunit K
polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051817.1 Reference ROS_Cfam_1.0

    Range
    2210619..2213385
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038684709.1 → XP_038540637.1  DNA-directed RNA polymerases I, II, and III subunit RPABC4

    UniProtKB/TrEMBL
    A0A8C0JGG6, A0A8C0KDJ4, A0A8C0NDJ7, A0A8C0RAP0, A0A8I3MSU0
    Conserved Domains (1) summary
    smart00659
    Location:15 → 58
    RPOLCX; RNA polymerase subunit CX

  2. XM_038684710.1 → XP_038540638.1  DNA-directed RNA polymerases I, II, and III subunit RPABC4

    UniProtKB/TrEMBL
    A0A8C0JGG6, A0A8C0KDJ4, A0A8C0NDJ7, A0A8C0RAP0, A0A8I3MSU0
    Conserved Domains (1) summary
    smart00659
    Location:15 → 58
    RPOLCX; RNA polymerase subunit CX

  3. XM_038684711.1 → XP_038540639.1  DNA-directed RNA polymerases I, II, and III subunit RPABC4

    UniProtKB/TrEMBL
    A0A8C0JGG6, A0A8C0KDJ4, A0A8C0NDJ7, A0A8C0RAP0, A0A8I3MSU0
    Conserved Domains (1) summary
    smart00659
    Location:15 → 58
    RPOLCX; RNA polymerase subunit CX

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049273.1 Alternate UMICH_Zoey_3.1

    Range
    2054820..2057586
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038492928.1 → XP_038348856.1  DNA-directed RNA polymerases I, II, and III subunit RPABC4

    Conserved Domains (1) summary
    smart00659
    Location:15 → 58
    RPOLCX; RNA polymerase subunit CX

  2. XM_038492929.1 → XP_038348857.1  DNA-directed RNA polymerases I, II, and III subunit RPABC4

    Conserved Domains (1) summary
    smart00659
    Location:15 → 58
    RPOLCX; RNA polymerase subunit CX

  3. XM_038492930.1 → XP_038348858.1  DNA-directed RNA polymerases I, II, and III subunit RPABC4

    Conserved Domains (1) summary
    smart00659
    Location:15 → 58
    RPOLCX; RNA polymerase subunit CX

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049754.1 Alternate UNSW_CanFamBas_1.0

    Range
    2166853..2169621
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038619089.1 → XP_038475017.1  DNA-directed RNA polymerases I, II, and III subunit RPABC4

    Conserved Domains (1) summary
    smart00659
    Location:15 → 58
    RPOLCX; RNA polymerase subunit CX

  2. XM_038619090.1 → XP_038475018.1  DNA-directed RNA polymerases I, II, and III subunit RPABC4

    Conserved Domains (1) summary
    smart00659
    Location:15 → 58
    RPOLCX; RNA polymerase subunit CX

  3. XM_038619091.1 → XP_038475019.1  DNA-directed RNA polymerases I, II, and III subunit RPABC4

    Conserved Domains (1) summary
    smart00659
    Location:15 → 58
    RPOLCX; RNA polymerase subunit CX

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049234.1 Alternate UU_Cfam_GSD_1.0

    Range
    2167859..2170628
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038555194.1 → XP_038411122.1  DNA-directed RNA polymerases I, II, and III subunit RPABC4

    UniProtKB/TrEMBL
    A0A8C0JGG6, A0A8C0KDJ4, A0A8C0NDJ7, A0A8C0RAP0, A0A8I3MSU0
    Conserved Domains (1) summary
    smart00659
    Location:15 → 58
    RPOLCX; RNA polymerase subunit CX

  2. XM_038555195.1 → XP_038411123.1  DNA-directed RNA polymerases I, II, and III subunit RPABC4

    UniProtKB/TrEMBL
    A0A8C0JGG6, A0A8C0KDJ4, A0A8C0NDJ7, A0A8C0RAP0, A0A8I3MSU0
    Conserved Domains (1) summary
    smart00659
    Location:15 → 58
    RPOLCX; RNA polymerase subunit CX

  3. XM_038555196.1 → XP_038411124.1  DNA-directed RNA polymerases I, II, and III subunit RPABC4

    UniProtKB/TrEMBL
    A0A8C0JGG6, A0A8C0KDJ4, A0A8C0NDJ7, A0A8C0RAP0, A0A8I3MSU0
    Conserved Domains (1) summary
    smart00659
    Location:15 → 58
    RPOLCX; RNA polymerase subunit CX

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006595.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    2054931..2057697
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003431782.5 → XP_003431830.1  DNA-directed RNA polymerases I, II, and III subunit RPABC4

    See identical proteins and their annotated locations for XP_003431830.1

    UniProtKB/TrEMBL
    A0A8C0JGG6, A0A8C0KDJ4, A0A8C0NDJ7, A0A8C0RAP0, A0A8I3MSU0
    Conserved Domains (1) summary
    smart00659
    Location:15 → 58
    RPOLCX; RNA polymerase subunit CX

  2. XM_022426582.2 → XP_022282290.1  DNA-directed RNA polymerases I, II, and III subunit RPABC4

    UniProtKB/TrEMBL
    A0A8C0JGG6, A0A8C0KDJ4, A0A8C0NDJ7, A0A8C0RAP0, A0A8I3MSU0
    Conserved Domains (1) summary
    smart00659
    Location:15 → 58
    RPOLCX; RNA polymerase subunit CX

  3. XM_022426583.2 → XP_022282291.1  DNA-directed RNA polymerases I, II, and III subunit RPABC4

    UniProtKB/TrEMBL
    A0A8C0JGG6, A0A8C0KDJ4, A0A8C0NDJ7, A0A8C0RAP0, A0A8I3MSU0
    Conserved Domains (1) summary
    smart00659
    Location:15 → 58
    RPOLCX; RNA polymerase subunit CX
Nucleotide Protein
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