U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PSMD4 proteasome 26S subunit ubiquitin receptor, non-ATPase 4 [ Pan troglodytes (chimpanzee) ]

Gene ID: 100192399, updated on 13-Apr-2024

Summary

Official Symbol
PSMD4provided by VGNC
Official Full Name
proteasome 26S subunit ubiquitin receptor, non-ATPase 4provided by VGNC
Primary source
VGNC:VGNC:9885
Locus tag
CK820_G0046999
See related
Ensembl:ENSPTRG00000013893
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Location:
chromosome: 1
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 1 NC_072398.2 (97948648..97961398, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 1 NC_072398.1 (133388338..133401088)

Chromosome 1 - NC_072398.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107968336 Neighboring gene phosphatidylinositol 4-kinase beta Neighboring gene uncharacterized LOC134810397 Neighboring gene zinc finger protein 687 Neighboring gene phosphatidylinositol-4-phosphate 5-kinase type 1 alpha Neighboring gene vacuolar protein sorting 72 homolog

Genomic regions, transcripts, and products

Pathways from PubChem

General protein information

Preferred Names
26S proteasome non-ATPase regulatory subunit 4
Names
proteasome (prosome, macropain) 26S subunit, non-ATPase, 4
proteasome 26S subunit, non-ATPase 4

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001137557.1NP_001131029.1  26S proteasome non-ATPase regulatory subunit 4

    See identical proteins and their annotated locations for NP_001131029.1

    Status: PROVISIONAL

    Source sequence(s)
    JAQQLN020000001
    UniProtKB/TrEMBL
    A0A2J8JJI4, A0A6D2YAS5, H2PZY5, K7BK90
    Related
    ENSPTRP00000002183.6, ENSPTRT00000002381.7
    Conserved Domains (2) summary
    cd01452
    Location:1187
    VWA_26S_proteasome_subunit; 26S proteasome plays a major role in eukaryotic protein breakdown, especially for ubiquitin-tagged proteins. It is an ATP-dependent protease responsible for the bulk of non-lysosomal proteolysis in eukaryotes, often using covalent modification of ...
    cd22297
    Location:320363
    PSMD4_RAZUL; RAZUL (Rpn10 AZUL-binding) domain of 26S proteasome non-ATPase regulatory subunit 4 (PSMD4) and similar proteins

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072398.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    97948648..97961398 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009430245.2XP_009428520.1  26S proteasome non-ATPase regulatory subunit 4 isoform X1

    See identical proteins and their annotated locations for XP_009428520.1

    UniProtKB/TrEMBL
    A0A2J8JJG6, K7A458
    Related
    ENSPTRP00000069212.1
    Conserved Domains (2) summary
    cd01452
    Location:1187
    VWA_26S_proteasome_subunit; 26S proteasome plays a major role in eukaryotic protein breakdown, especially for ubiquitin-tagged proteins. It is an ATP-dependent protease responsible for the bulk of non-lysosomal proteolysis in eukaryotes, often using covalent modification of ...
    cd22297
    Location:323366
    PSMD4_RAZUL; RAZUL (Rpn10 AZUL-binding) domain of 26S proteasome non-ATPase regulatory subunit 4 (PSMD4) and similar proteins
  2. XM_054656669.2XP_054512644.1  26S proteasome non-ATPase regulatory subunit 4 isoform X3

  3. XM_009430249.5XP_009428524.1  26S proteasome non-ATPase regulatory subunit 4 isoform X2

    See identical proteins and their annotated locations for XP_009428524.1

    UniProtKB/TrEMBL
    A0A2I3RY08
    Conserved Domains (2) summary
    cd22297
    Location:276319
    PSMD4_RAZUL; RAZUL (Rpn10 AZUL-binding) domain of 26S proteasome non-ATPase regulatory subunit 4 (PSMD4) and similar proteins
    cl00057
    Location:10140
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...