Mycobrowser is a resource that provides both in silico generated and manually reviewed information within databases dedicated to the complete genomes of Mycobacterium tuberculosis, Mycobacterium leprae, Mycobacterium marinum and Mycobacterium smegmatis. This collection references Mycobacteria tuberculosis information.
myco.tuber
Local identifiers in TubercuList knowledge base should match this
regular expression:
^Rv\d{4}(A|B|c)?$
Compact URIs (CURIEs) constructed from TubercuList knowledge base should match
this regular expression:
^myco\.tuber:Rv\d{4}(A|B|c)?$
The metaregistry provides mappings between the Bioregistry and other registries. There are 6 mappings to external registries for this resource with 3 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
BioContext | biocontext |
MYCO.TUBER
|
|
Identifiers.org | miriam |
myco.tuber
|
|
N2T | n2t |
myco.tuber
|
|
NCBI | ncbi |
TubercuList
|
|
Prefix Commons | prefixcommons |
tuberculist
|
|
UniProt | uniprot |
DB-0106
|
Providers are various services that resolve CURIEs to URLs. The example CURIE
myco.tuber:Rv1908c
is used to demonstrate the provides available for
this resource. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
Name | Metaprefix | URI |
---|---|---|
TubercuList knowledge base | myco.tuber |
http://tuberculist.epfl.ch/quicksearch.php?gene+name=Rv1908c |
Bioregistry | bioregistry |
https://bioregistry.io/myco.tuber:Rv1908c |
Identifiers.org | miriam |
https://identifiers.org/myco.tuber:Rv1908c |
Name-to-Thing | n2t |
https://n2t.net/myco.tuber:Rv1908c |
Additional providers curated in the Bioregistry are listed here.
Code | Name | URL |
---|---|---|
bio2rdf |
Bio2RDF | http://bio2rdf.org/tuberculist:Rv1908c |