miR165a
DB statistics:
  • Wednesday, January 8th 2025:
  • 114 miRNA familiesNews divider
  • 190 pre-miRNA sequencesNews divider
  • 7 developmental stages News divider
  • 190 hairpin structures
Expression
Switch to: Actin
Expression ProfileReference: pp2a

The expression values are rescaled. Read more

Expression Data

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Expression Data
Development stageactinPP2A
LogSDLogSD
seed3.863481.135833.935991.01636
10day-seedling2.96360.3768434.771760.20624
14day-seedling2.7014504.70160
25day-aerial2.649410.8385184.413890.840959
35day-aerial3.049350.4692154.816370.378472
42day-rosette2.519740.7854154.436820.989447
42day-stem3.376580.1404745.101940.085325
53day-rosette1.913620.5825973.756120.593468
53day-stem2.86360.3834334.281070.80397
53day-inflores3.620650.1886975.044690.243301
53day-silique4.044960.1640645.187560.153365
Raw Expression Data

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Raw Data
NGS expression data
Expression of miR165a transcript in NGS data
Sequences
miRNA transcript
CUGCUAAGAUCGAUUAUCAUGAGGGUUAAGCUAUUUCAGUUGAGGGGAAUGUUGUCUGGAUCGAGGAUAUUAUAGAUAUAUACAUGUGUAUGUUAAUGAUUCAAGUGAUCAUAGAGAGUAUCCUCGGACCAGGCUUCAUCCCCCCCAACAUGUUAUUGCCUCUGAUCACCAUUUAUUGUUACAUUUUUUUUUGUUAAUUACUUGCGCAAAUUACAAAAGCUUGGUUUUUGUGAUGACUUUGAAUC
Short sequences
sequencetypearmstartend
UCGGACCAGGCUUCAUCCCCC
miRNA124144
TGCTAAGATCGATTATCATGAGGGTTA
primer5p228
TTCAAAGTCATCACAAAAACCAAGC
primer3p219243

For experimental procedure see:Materials and Methods


Cross-references
miRBasemiRBase record
ASRPASRP record
PMRDPMRD record
TAIRTAIR record
PubMed EntrezThe most up-to-date article(s) about miR165a found in PubMed

STRUCTURE

miRNA
miRNA*
primer 5p
primer 3p
sRNA

Length = 245 nt
MFE = -73.10 kcal/mol

COMMENTS