TarBase stores microRNA (miRNA) information for miRNA–gene interactions, as well as miRNA- and gene-related facts to information specific to the interaction and the experimental validation methodologies used.

Prefix
tarbase
Keywords
biomedical science life science
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in TarBase should match this regular expression:
^[a-z]{3}\-(mir|let|lin)\-\w+(\-\w+\-\w+)$

Example Local Unique Identifier
hsa-let-7a-2-3p   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from TarBase should match this regular expression:
^tarbase:[a-z]{3}\-(mir|let|lin)\-\w+(\-\w+\-\w+)$

Example CURIE
tarbase:hsa-let-7a-2-3p
Publications
Metaregistry TarBase

The metaregistry provides mappings between the Bioregistry and other registries. There are 6 mappings to external registries for this resource with 4 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext TARBASE
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.a0k4cd
Integbio Integbio logo integbio nbdc02102
Identifiers.org Identifiers.org logo miriam tarbase
N2T Name-to-Thing logo n2t tarbase
Pathguide Pathguide logo pathguide 283
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE tarbase:hsa-let-7a-2-3p is used to demonstrate the provides available for this resource. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
TarBase tarbase http://diana.imis.athena-innovation.gr/DianaTools/index.php?r=tarbase/index&mirnas=hsa-let-7a-2-3p
Bioregistry bioregistry https://bioregistry.io/tarbase:hsa-let-7a-2-3p
Identifiers.org miriam https://identifiers.org/tarbase:hsa-let-7a-2-3p
Name-to-Thing n2t https://n2t.net/tarbase:hsa-let-7a-2-3p