TarBase stores microRNA (miRNA) information for miRNA–gene interactions, as well as miRNA- and gene-related facts to information specific to the interaction and the experimental validation methodologies used.
tarbase
Local identifiers in TarBase should match this
regular expression:
^[a-z]{3}\-(mir|let|lin)\-\w+(\-\w+\-\w+)$
Compact URIs (CURIEs) constructed from TarBase should match
this regular expression:
^tarbase:[a-z]{3}\-(mir|let|lin)\-\w+(\-\w+\-\w+)$
The metaregistry provides mappings between the Bioregistry and other registries. There are 6 mappings to external registries for this resource with 4 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
BioContext | biocontext |
TARBASE
|
|
FAIRSharing | fairsharing |
FAIRsharing.a0k4cd
|
|
Integbio | integbio |
nbdc02102
|
|
Identifiers.org | miriam |
tarbase
|
|
N2T | n2t |
tarbase
|
|
Pathguide | pathguide |
283
|
Providers are various services that resolve CURIEs to URLs. The example CURIE
tarbase:hsa-let-7a-2-3p
is used to demonstrate the provides available for
this resource. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.