PRINTS is a compendium of protein fingerprints. A fingerprint is a group of conserved motifs used to characterise a protein family; its diagnostic power is refined by iterative scanning of a SWISS-PROT/TrEMBL composite. Usually the motifs do not overlap, but are separated along a sequence, though they may be contiguous in 3D-space. Fingerprints can encode protein folds and functionalities more flexibly and powerfully than can single motifs, full diagnostic potency deriving from the mutual context provided by motif neighbours.
prints
Local identifiers in PRINTS compendium of protein fingerprints should match this
regular expression:
^PR\d{5}$
Compact URIs (CURIEs) constructed from PRINTS compendium of protein fingerprints should match
this regular expression:
^prints:PR\d{5}$
The metaregistry provides mappings between the Bioregistry and other registries. There are 8 mappings to external registries for this resource with 5 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
BioContext | biocontext |
PRINTS
|
|
FAIRSharing | fairsharing |
FAIRsharing.h8r843
|
|
GO | go |
PRINTS
|
|
Integbio | integbio |
nbdc00039
|
|
Identifiers.org | miriam |
prints
|
|
N2T | n2t |
prints
|
|
Prefix Commons | prefixcommons |
sprint
|
|
UniProt | uniprot |
DB-0082
|
Providers are various services that resolve CURIEs to URLs. The example CURIE
prints:PR00001
is used to demonstrate the provides available for
this resource. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
Additional providers curated in the Bioregistry are listed here.
Code | Name | URL |
---|---|---|
bio2rdf |
Bio2RDF | http://bio2rdf.org/sprint:PR00001 |
prints.alt1 |
PRINTS Alt. 1 | http://130.88.97.239/cgi-bin/dbbrowser/sprint/searchprintss.cgi?display_opts=Prints&category=None&queryform=false®expr=off&prints_accn=PR00001 |