The PeptideAtlas Project provides a publicly accessible database of peptides identified in tandem mass spectrometry proteomics studies and software tools.

Prefix

peptideatlas

Keywords

mass spectrometry protein proteomics structure

Links

Homepage

Contact

Eric W. Deutsch   0000-0001-8732-0928   edeutsch

Pattern for Local Unique Identifiers

Local identifiers in PeptideAtlas should match this regular expression:
^PAp[0-9]{8}$

Example Local Unique Identifier

PAp00000009   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from PeptideAtlas should match this regular expression:
^peptideatlas:PAp[0-9]{8}$

Example CURIE

peptideatlas:PAp00000009

Publications

• 2008 PeptideAtlas: a resource for target selection for emerging targeted proteomics workflows
• 2006 The PeptideAtlas project
• PeptideAtlas: a resource for target selection for emerging targeted proteomics workflows.

The metaregistry provides mappings between the Bioregistry and other registries. There are 9 mappings to external registries for this resource with 6 unique external prefixes.

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier PAp00000009 is used to demonstrate the providers available for PeptideAtlas. A guide for curating additional providers can be found here.

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.