The PANTHER (Protein ANalysis THrough Evolutionary Relationships) Classification System is a resource that classifies genes by their functions, using published scientific experimental evidence and evolutionary relationships to predict function even in the absence of direct experimental evidence. This collection references groups of genes that have been organised as families.

Prefix

panther.family

Keywords

classification gene ontology pathway protein

Links

Homepage

Contact

Missing Contact

Pattern for Local Unique Identifiers

Local identifiers in PANTHER Family should match this regular expression:
^PTHR\d{5}(\:SF\d{1,3})?$

Example Local Unique Identifier

PTHR12345   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from PANTHER Family should match this regular expression:
^panther\.family:PTHR\d{5}(\:SF\d{1,3})?$

Example CURIE

panther.family:PTHR12345

Publications

• 2019 PANTHER version 14: more genomes, a new PANTHER GO-slim and improvements in enrichment analysis tools
• 2003 PANTHER: a library of protein families and subfamilies indexed by function

A summary of the relations in the Bioregistry schema can be found here.

Part Of (bfo:0000050 )

panther (not directly registered)

In Collection

Global Biodata Coalition - Global Core Biodata Resources

The metaregistry provides mappings between the Bioregistry and other registries. There are 7 mappings to external registries for this resource with 3 unique external prefixes.

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier PTHR12345 is used to demonstrate the providers available for PANTHER Family. A guide for curating additional providers can be found here.

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.