CATH is a classification of protein structural domains. We group protein domains into superfamilies when there is sufficient evidence they have diverged from a common ancestor. CATH can be used to predict structural and functional information directly from protein sequence.
cath
Local identifiers in CATH Protein Structural Domain Superfamily should match this
regular expression:
^[1-6]\.[0-9]+\.[0-9]+\.[0-9]+$
Compact URIs (CURIEs) constructed from CATH Protein Structural Domain Superfamily should match
this regular expression:
^cath:[1-6]\.[0-9]+\.[0-9]+\.[0-9]+$
A summary of the relations in the Bioregistry schema can be found here.
bfo:0000051
)
The metaregistry provides mappings between the Bioregistry and other registries. There are 7 mappings to external registries for this resource with 4 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
BioContext | biocontext |
CATH
|
|
EDAM | edam |
2700
|
|
FAIRSharing | fairsharing |
FAIRsharing.xgcyyn
|
|
Identifiers.org | miriam |
cath
|
|
N2T | n2t |
cath
|
|
Prefix Commons | prefixcommons |
cath
|
|
re3data | re3data |
r3d100012629
|
Providers are various services that resolve CURIEs to URLs. The example CURIE
cath:1.10.8.10
is used to demonstrate the provides available for
this resource. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
Additional providers curated in the Bioregistry are listed here.
Code | Name | URL |
---|---|---|
bio2rdf |
Bio2RDF | http://bio2rdf.org/cath:1.10.8.10 |