The University of Minnesota Biocatalysis/Biodegradation Database (UM-BBD) contains information on microbial biocatalytic reactions and biodegradation pathways for primarily xenobiotic, chemical compounds. The goal of the UM-BBD is to provide information on microbial enzyme-catalyzed reactions that are important for biotechnology. This collection refers to pathway information.
umbbd.pathway
Local identifiers in EAWAG Biocatalysis/Biodegradation Database should match this
regular expression:
^\w+$
Compact URIs (CURIEs) constructed from EAWAG Biocatalysis/Biodegradation Database should match
this regular expression:
^umbbd\.pathway:\w+$
A summary of the relations in the Bioregistry schema can be found here.
bfo:0000050
)
The metaregistry provides mappings between the Bioregistry and other registries. There are 4 mappings to external registries for this resource with 2 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
BioContext | biocontext |
UMBBD.PATHWAY
|
|
GO | go |
UM-BBD_pathwayID
|
|
Identifiers.org | miriam |
umbbd.pathway
|
|
N2T | n2t |
umbbd.pathway
|
Providers are various services that resolve CURIEs to URLs. The example CURIE
umbbd.pathway:ala
is used to demonstrate the provides available for
this resource. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
Additional providers curated in the Bioregistry are listed here.
Code | Name | URL |
---|---|---|
eawag |
Pathway map diagram | http://eawag-bbd.ethz.ch/ala/ala_map.html |